| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066181
Identifier: 78066181
GI number: 78066181
Start: 1705579
End: 1706379
Strand: Reverse
Name: 78066181
Synonym: Bcep18194_A4711
Alternate gene names: NA
Gene position: 1706379-1705579 (Counterclockwise)
Preceding gene: 78066183
Following gene: 78066173
Centisome position: 46.19
GC content: 59.18
Gene sequence:
>801_bases ATGGAAGATAACGGCACGGGGCGCGCTAACCTTAGTGCGGAAAGAAAACTTCGCAACGTCACGCCGTCTGGATACAGCCA TACAATCTCGCATCGAAGATCCGTTGATGAAAACCGGCGACGCAGTGACGATATCCTGTCGCTCCCGACTCTGGCCGTCC GCCAATCGCGCGCAGTTCCACCCGGTTTGCTCGTCGCGAAGCGCCAGTCCGTTCAATCAGCCATGTATGGCAAACTTCGG CTCCGAATCGACGCAGCGCGCACTCTTTACCGCAGGGAAATCATGTACGTCTTGATCTATATCGCAGCAGTCGCTGTCGC GAATCTGATGGTCGCTCATTTCGGACCGGCTGCCACACCGATCATCGCGTTCTTTCTGATCGGACTCGATCTCGCGATTC GCGACCGGCTCCACCTGGACTGGCGCGGCCGCGCGCTTTGGTCACGGATGTTTGCGTTGATCGCGGCGGCCGGCGTCGTC AGTTACGCGCTCAATCCCGCCGCCAAGGAAATCGCCCTCGCGTCTCTCGTAGCGTTCGGTTCGGCAGCCCTGGCAAGTGC AATCGTGTTTCAACTCGCACGTCGCTTTCCGATACTGGCGCGCGCAAACGGCGCGAACGTCGCGGGTGCGGCTGTCGACT CCATCGTCTTTCCGCTTATTGCGTTCGGTGCAGTGTTTCCGACGATCGCCGCGTTGCAGTTCGTCGCAAAGGTGGCTGGC GGTGCTTTGTGGTCGTGGGTGGTATTTAGAAACACCCGGACGGTTCAGGCGGGAATCGCGAGCAATGTGAGTGATCATTG A
Upstream 100 bases:
>100_bases ATTCATGCGCCAACGAGCGACCATAAACGAAAAAAGCCTGCTCACGCGGAACGCGAGCAGGCAAGAAAACGGATCAGCAT TCGAGGCACGAGGGCTGTCC
Downstream 100 bases:
>100_bases GGACGGGTTTGCTTTTCCGCGGCTTCACTTCGTTCATCTACTCGCCTATCCGAACGCCAAAAGAGCACAATGCCCGATCT GCAGCGCAGTGAACCGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MEDNGTGRANLSAERKLRNVTPSGYSHTISHRRSVDENRRRSDDILSLPTLAVRQSRAVPPGLLVAKRQSVQSAMYGKLR LRIDAARTLYRREIMYVLIYIAAVAVANLMVAHFGPAATPIIAFFLIGLDLAIRDRLHLDWRGRALWSRMFALIAAAGVV SYALNPAAKEIALASLVAFGSAALASAIVFQLARRFPILARANGANVAGAAVDSIVFPLIAFGAVFPTIAALQFVAKVAG GALWSWVVFRNTRTVQAGIASNVSDH
Sequences:
>Translated_266_residues MEDNGTGRANLSAERKLRNVTPSGYSHTISHRRSVDENRRRSDDILSLPTLAVRQSRAVPPGLLVAKRQSVQSAMYGKLR LRIDAARTLYRREIMYVLIYIAAVAVANLMVAHFGPAATPIIAFFLIGLDLAIRDRLHLDWRGRALWSRMFALIAAAGVV SYALNPAAKEIALASLVAFGSAALASAIVFQLARRFPILARANGANVAGAAVDSIVFPLIAFGAVFPTIAALQFVAKVAG GALWSWVVFRNTRTVQAGIASNVSDH >Mature_266_residues MEDNGTGRANLSAERKLRNVTPSGYSHTISHRRSVDENRRRSDDILSLPTLAVRQSRAVPPGLLVAKRQSVQSAMYGKLR LRIDAARTLYRREIMYVLIYIAAVAVANLMVAHFGPAATPIIAFFLIGLDLAIRDRLHLDWRGRALWSRMFALIAAAGVV SYALNPAAKEIALASLVAFGSAALASAIVFQLARRFPILARANGANVAGAAVDSIVFPLIAFGAVFPTIAALQFVAKVAG GALWSWVVFRNTRTVQAGIASNVSDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28703; Mature: 28703
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDNGTGRANLSAERKLRNVTPSGYSHTISHRRSVDENRRRSDDILSLPTLAVRQSRAVP CCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCCCC PGLLVAKRQSVQSAMYGKLRLRIDAARTLYRREIMYVLIYIAAVAVANLMVAHFGPAATP CCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IIAFFLIGLDLAIRDRLHLDWRGRALWSRMFALIAAAGVVSYALNPAAKEIALASLVAFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SAALASAIVFQLARRFPILARANGANVAGAAVDSIVFPLIAFGAVFPTIAALQFVAKVAG HHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GALWSWVVFRNTRTVQAGIASNVSDH CHHHHHHHHHCCCHHHHHHHCCCCCC >Mature Secondary Structure MEDNGTGRANLSAERKLRNVTPSGYSHTISHRRSVDENRRRSDDILSLPTLAVRQSRAVP CCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHCCCCC PGLLVAKRQSVQSAMYGKLRLRIDAARTLYRREIMYVLIYIAAVAVANLMVAHFGPAATP CCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IIAFFLIGLDLAIRDRLHLDWRGRALWSRMFALIAAAGVVSYALNPAAKEIALASLVAFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SAALASAIVFQLARRFPILARANGANVAGAAVDSIVFPLIAFGAVFPTIAALQFVAKVAG HHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GALWSWVVFRNTRTVQAGIASNVSDH CHHHHHHHHHCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA