| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066123
Identifier: 78066123
GI number: 78066123
Start: 1642647
End: 1643057
Strand: Direct
Name: 78066123
Synonym: Bcep18194_A4653
Alternate gene names: NA
Gene position: 1642647-1643057 (Clockwise)
Preceding gene: 78066122
Following gene: 78066128
Centisome position: 44.47
GC content: 61.8
Gene sequence:
>411_bases ATGACACCGTATCGCGATCTGACCGACCAAGAGTGGCGCTGCGTAGCGTCGCTTCTGCCCGAAATGCAGCCGCGCACCGA GTTGCGCGGCCGTCCGTTGGCCAATACGCGTGCCGTCCTGAACGGCGTGCTCTGGGTGATCTACAGCGGCGCAACGTGGT CGGCCATGCCGCGTCGTTACCCTTCCTACCAAACTTGCCATCGTCGCTTCAAGGTCTGGCACGAGACGGGCACGTTGATG AGTGTCATGCGTGAACTCTATGGCGACGCGGGTGTGAATCTGTGCAACGAGTTGTCGACGCGGATGCGCAAGCACACGCA ATCGAAGGCGGCGGAAGCACGCAGCAATGTGGCGCCCGCGTATCGCGCACCTGGTAGCTATGTGTCGGACACGCTGAAGC ATGCAGCGTGA
Upstream 100 bases:
>100_bases CAAATTAAGGCAATCTCGGGGTATTTTCGGATTTGTCTTATATTCATTGTTGAGGTGAGCCGATATCGTTGTGTCATGGT TACTAAGGCTGGAGATGTCC
Downstream 100 bases:
>100_bases TGTTCTTCAGTTCCCGCTACGCACGCACCAAAAGAAAATCGGCCTGACGACTTCGTCGCAGGCCGATTTTTTCATTGAGC CGCGCGTTTAAGCGCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase A-Like Protein; Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; ISAca3 Transposase OrfA; IS5 Family Transposase OrfA; ISBm1 Transposase OrfA; ISPs1 Transposase OrfA; IS5 Family Transposase
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTPYRDLTDQEWRCVASLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLM SVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARSNVAPAYRAPGSYVSDTLKHAA
Sequences:
>Translated_136_residues MTPYRDLTDQEWRCVASLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLM SVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARSNVAPAYRAPGSYVSDTLKHAA >Mature_135_residues TPYRDLTDQEWRCVASLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRYPSYQTCHRRFKVWHETGTLMS VMRELYGDAGVNLCNELSTRMRKHTQSKAAEARSNVAPAYRAPGSYVSDTLKHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15518; Mature: 15387
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPYRDLTDQEWRCVASLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRY CCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PSYQTCHRRFKVWHETGTLMSVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARSNVAPA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YRAPGSYVSDTLKHAA CCCCCHHHHHHHHHCC >Mature Secondary Structure TPYRDLTDQEWRCVASLLPEMQPRTELRGRPLANTRAVLNGVLWVIYSGATWSAMPRRY CCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PSYQTCHRRFKVWHETGTLMSVMRELYGDAGVNLCNELSTRMRKHTQSKAAEARSNVAPA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YRAPGSYVSDTLKHAA CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA