Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is pheT

Identifier: 78066091

GI number: 78066091

Start: 1601909

End: 1604338

Strand: Direct

Name: pheT

Synonym: Bcep18194_A4620

Alternate gene names: 78066091

Gene position: 1601909-1604338 (Clockwise)

Preceding gene: 161702961

Following gene: 78066092

Centisome position: 43.36

GC content: 65.39

Gene sequence:

>2430_bases
ATGCAATTCCCTGAATCCTGGTTGAGAACCTTTGTCGACCCGCAGCTGACGACCGACGAACTGTCGCACGCGCTGACGAT
GGCGGGGCTCGAAGTCGAATCGCTGAGCAAGGCTGCGCCGCCGACGTCGAAGATCGTCGTCGGCCGCGTGCTCGAAGTCG
TCAAGCATCCGGATGCGGACAAGCTCAATGTCTGCCAGGTCGACGCCGGCACCGGCGCGACGCTGAATATCGTCTGCGGC
GCACCGAACGTCGCGCCCGGCATCAAGGTACCGGTCGCGCTGGTCGGTGCGGAACTGCCGCCGGCAGAAGAGGGCGGCAA
GCCGTTCGCGATCAAGCTGTCGAAGCTGCGCGGCGTGGAGAGCCAGGGGATGCTGTGCTCGGCACGCGAGCTGAAGCTGT
CCGAGGATCACAGCGGGCTGCTGGTGTTGCCGGAAGACACGCCGGTCGGCCAGGACATCCGCGAGACGCTCAATCTCGAC
GACACGATCTTCGAAATCAAGCTGACGCCGAACAAGGCCGACTGCCTGTCCGTGTTCGGCATTGCACGCGAGACGGCCGC
GATCACCGGCGCGCCGCTGACGCCGGTCGACATCCGCCCGGTGCGCGTCGAGCTCGACGAGACGCTGCCGGTGCGCATTG
CCGCGCCCGATCTGTGCGGTCGCTTCTCGGGTCGCGTGATCCGTGGCGTGAACGCGCATGCGAAGACGCCGCAGTGGATG
GTCGAGCGCCTCGCGCGTTCCGGCCAGCGCAGCGTGTCGGCGCTCGTCGACATCTCGAACTACGTGATGTTCGAGCTCGG
CCGCCCGTCGCACGTGTTCGATCTCGACAAGATCCACGGCGGTATCGAGGTGCGCTGGGGCAAGCGCGGCGAATCGCTGA
AGCTGCTCAACGGCAACACGGTCGAACTCGACGAAACGGTCGGCGTGATTTCGGACGGCCGTCAGGTCGAAAGCCTGGCC
GGCATCATGGGCGGTGACAGCACGGCCGTCACGCTCGATACGACCAACATCTACCTGGAAGCCGCATTCTGGTGGCCGGA
CAGCATCCGCGGCCGTGCGCGCAAGTACAACTTCTCGACCGATGCGGCTCATCGCTTCGAGCGCGGCGTCGACTACGCGA
CGACCGTCGAACACGTCGAGCGCATTACGCAACTGATTCTCGAAATCTGCGGCGGCAAGGCCGGCCCGGTCGACGATCAG
TCGGTGAACCTGCCGCAGCGCGCGCCGGTGAAGATGCGCGTATCGCGCGCGAACCGCATCATCGGCGTGCAGATTGGCGC
CGACGAGATCGCCAGCATCTTCACGCGCCTCGGCCTGCCGTTCGAGCGTGAAGACGATGCGTTCCTCGTCACGCCGCCGT
CGCATCGCTTCGACATCGAGATCGAGGAAGACCTGATCGAGGAAGTGGCGCGCATCTACGGCTTCGAAAAGATCCCGGCG
CGTCCGCCGGTCGCGACGAGCGAAATGCGCGCGACCAACGAGACGCGGCGCTCGATTCACGACATCCGTCACGCGCTCGC
CGCGCGCGACTACGCGGAAACCGTCAACTTCAGCTTCGTCGATGCGGAGTGGGAGCAGGATTTCGCGGGCAACGACCATC
CGATCCGTCTGCTGAACCCGATCGCGAGCCAGTTGTCGGTGATGCGCACGACGCTGTTCGGCAGCCTGATTTCCGTGCTG
CGCCACAACCTGAACCGCCGCGCGGATCGTGTGCGCCTGTTCGAGGCCGGTCGCGTGTTCCTTACCGATGCGGCGTCGAA
GGCCGGTGAGCTGACGGTCGAGGGCTACGTGCAGCCGAAGCGCGTCGGTGCGCTTGCCTATGGTCCGGCGCTCGACGAGC
AGTGGGGCGCGGAAACCCGCCCGGTCGATTTCTTCGACGTGAAGGGCGATCTCGAGGCGCTGCTCGCGCCCGCGGCCGCA
CGCTTCGTGAAGGCCGAGCATCCGGCCCTCCATCCGGGCCGCAGCGCGCGCATCGAAGTCGATGGCCGTGCGGTCGGCTG
GATCGGCGAACTGCACCCGCGCCTGATGCAGAAGTACGAGCTGCCGCACGCGCCGGTGATGTTCGAGGTCGACGCGGACG
CGCTGATTGCGCGTGCATTGCCCGCGCCGACCGACGTGTCGAAATTCCCGCCGGTTCGTCGCGATATTGCCGTGGTCGTC
GATCAGGCGGTCGAGGTTCAGGCACTTTTCGACGAAATGAAGAAGGCGCTTGCCGAAGAGGCCTGCCGATTCGTTCAGAA
GGTTGTACTCTTCGACGAATTTCGTGCAAAATCAAATACTTCCGGTGGTCTTGCCGCGCACGAGAAGAGCCTTGCCTTCC
GTGTGACGCTGCAGGACGCGGCTGGCACGCTACAGGACGAGGTCGTCGATCAGGCGATCCAGACGCTGGTCGAGCGGATG
GCTCGTGCTGGTGCGCGTCTGCGCGGCTAA

Upstream 100 bases:

>100_bases
GTAACGCCGCGCGCCGCGCCGACCTGTGCCCGTGCACGCCCCGACGGACGATCCGATGGGGCCCGGGCGTCGATCTAACC
TGTTTCGAACGTAGACATCC

Downstream 100 bases:

>100_bases
GGAGGAGGTCCGCCCGCTCGCGGGCGGCCTTTTCCGATCGTAAGTTTTGATTTAACGCGCTGTATGGCAGATATGAACGA
CATGACCTCGAGTGAATTCG

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS

Number of amino acids: Translated: 809; Mature: 809

Protein sequence:

>809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVESQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLD
DTIFEIKLTPNKADCLSVFGIARETAAITGAPLTPVDIRPVRVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
VERLARSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNTVELDETVGVISDGRQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQ
SVNLPQRAPVKMRVSRANRIIGVQIGADEIASIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATNETRRSIHDIRHALAARDYAETVNFSFVDAEWEQDFAGNDHPIRLLNPIASQLSVMRTTLFGSLISVL
RHNLNRRADRVRLFEAGRVFLTDAASKAGELTVEGYVQPKRVGALAYGPALDEQWGAETRPVDFFDVKGDLEALLAPAAA
RFVKAEHPALHPGRSARIEVDGRAVGWIGELHPRLMQKYELPHAPVMFEVDADALIARALPAPTDVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAAHEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERM
ARAGARLRG

Sequences:

>Translated_809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVESQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLD
DTIFEIKLTPNKADCLSVFGIARETAAITGAPLTPVDIRPVRVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
VERLARSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNTVELDETVGVISDGRQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQ
SVNLPQRAPVKMRVSRANRIIGVQIGADEIASIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATNETRRSIHDIRHALAARDYAETVNFSFVDAEWEQDFAGNDHPIRLLNPIASQLSVMRTTLFGSLISVL
RHNLNRRADRVRLFEAGRVFLTDAASKAGELTVEGYVQPKRVGALAYGPALDEQWGAETRPVDFFDVKGDLEALLAPAAA
RFVKAEHPALHPGRSARIEVDGRAVGWIGELHPRLMQKYELPHAPVMFEVDADALIARALPAPTDVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAAHEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERM
ARAGARLRG
>Mature_809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVESQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLD
DTIFEIKLTPNKADCLSVFGIARETAAITGAPLTPVDIRPVRVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
VERLARSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNTVELDETVGVISDGRQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQ
SVNLPQRAPVKMRVSRANRIIGVQIGADEIASIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATNETRRSIHDIRHALAARDYAETVNFSFVDAEWEQDFAGNDHPIRLLNPIASQLSVMRTTLFGSLISVL
RHNLNRRADRVRLFEAGRVFLTDAASKAGELTVEGYVQPKRVGALAYGPALDEQWGAETRPVDFFDVKGDLEALLAPAAA
RFVKAEHPALHPGRSARIEVDGRAVGWIGELHPRLMQKYELPHAPVMFEVDADALIARALPAPTDVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAAHEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERM
ARAGARLRG

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain

Homologues:

Organism=Homo sapiens, GI124028525, Length=395, Percent_Identity=24.3037974683544, Blast_Score=85, Evalue=3e-16,
Organism=Escherichia coli, GI1788006, Length=815, Percent_Identity=41.7177914110429, Blast_Score=617, Evalue=1e-177,
Organism=Drosophila melanogaster, GI21355211, Length=409, Percent_Identity=25.1833740831296, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYFB_BURS3 (Q39H50)

Other databases:

- EMBL:   CP000151
- RefSeq:   YP_368860.1
- ProteinModelPortal:   Q39H50
- SMR:   Q39H50
- STRING:   Q39H50
- GeneID:   3749822
- GenomeReviews:   CP000151_GR
- KEGG:   bur:Bcep18194_A4620
- NMPDR:   fig|269483.3.peg.5940
- eggNOG:   COG0072
- HOGENOM:   HBG399638
- OMA:   ADKLRVC
- ProtClustDB:   PRK00629
- BioCyc:   BSP36773:BCEP18194_A4620-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00283
- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547
- Gene3D:   G3DSA:3.50.40.10
- Gene3D:   G3DSA:3.30.56.20
- Gene3D:   G3DSA:3.30.70.380
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00873
- SMART:   SM00874
- SMART:   SM00896
- TIGRFAMs:   TIGR00472

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind

EC number: =6.1.1.20

Molecular weight: Translated: 88619; Mature: 88619

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVE
CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEEHHHCCCC
SQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVFG
CCCCEEEHHHCEECCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
IARETAAITGAPLTPVDIRPVRVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
HHHHHHEECCCCCCCCCCEEEEEEECCCCCEEEECCHHHHHCCCCEEECCCCCCCCHHHH
VERLARSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNT
HHHHHHCCHHHHHHHHHHHCEEEEEECCCCCEEEHHHHCCCEEEEECCCCCEEEEECCCE
VELDETVGVISDGRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST
EEEHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECEEEEEEEEECCHHHCCCCEECCCCC
DAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQSVNLPQRAPVKMRVSRANRI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEE
IGVQIGADEIASIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
EEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
RPPVATSEMRATNETRRSIHDIRHALAARDYAETVNFSFVDAEWEQDFAGNDHPIRLLNP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCCCHHHHH
IASQLSVMRTTLFGSLISVLRHNLNRRADRVRLFEAGRVFLTDAASKAGELTVEGYVQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCEEEECCCCHH
RVGALAYGPALDEQWGAETRPVDFFDVKGDLEALLAPAAARFVKAEHPALHPGRSARIEV
HHCEEEECCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DGRAVGWIGELHPRLMQKYELPHAPVMFEVDADALIARALPAPTDVSKFPPVRRDIAVVV
CCCEEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAAHEKSLAFRVTLQDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEHHH
AGTLQDEVVDQAIQTLVERMARAGARLRG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVE
CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEEHHHCCCC
SQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVFG
CCCCEEEHHHCEECCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
IARETAAITGAPLTPVDIRPVRVELDETLPVRIAAPDLCGRFSGRVIRGVNAHAKTPQWM
HHHHHHEECCCCCCCCCCEEEEEEECCCCCEEEECCHHHHHCCCCEEECCCCCCCCHHHH
VERLARSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNT
HHHHHHCCHHHHHHHHHHHCEEEEEECCCCCEEEHHHHCCCEEEEECCCCCEEEEECCCE
VELDETVGVISDGRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST
EEEHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECEEEEEEEEECCHHHCCCCEECCCCC
DAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQSVNLPQRAPVKMRVSRANRI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEE
IGVQIGADEIASIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
EEEEECHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
RPPVATSEMRATNETRRSIHDIRHALAARDYAETVNFSFVDAEWEQDFAGNDHPIRLLNP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCCCHHHHH
IASQLSVMRTTLFGSLISVLRHNLNRRADRVRLFEAGRVFLTDAASKAGELTVEGYVQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCEEEECCCCHH
RVGALAYGPALDEQWGAETRPVDFFDVKGDLEALLAPAAARFVKAEHPALHPGRSARIEV
HHCEEEECCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DGRAVGWIGELHPRLMQKYELPHAPVMFEVDADALIARALPAPTDVSKFPPVRRDIAVVV
CCCEEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAAHEKSLAFRVTLQDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEHHH
AGTLQDEVVDQAIQTLVERMARAGARLRG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA