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The map label for this gene is infC [H]

Identifier: 78066087

GI number: 78066087

Start: 1599405

End: 1599875

Strand: Direct

Name: infC [H]

Synonym: Bcep18194_A4616

Alternate gene names: 78066087

Gene position: 1599405-1599875 (Clockwise)

Preceding gene: 78066086

Following gene: 78066088

Centisome position: 43.3

GC content: 55.63

Gene sequence:

>471_bases
GTGCGTCTGGTCGGGATCGAGAACGAACCGCTCGGTATCGTAAAACTCGCTGATGCTTTCCGTAAATCGGAAGAACTGGA
TGTTGACCTGGTGGAAATCGCGCCGCAAGCGGTTCCCCCGGTTTGCCGTCTGATGGATTACGGCAAGTTCAAGTACCAGG
AATCGAAGAAGCAGCACGAAGCGAAGCTGAAGCAGAAGGTCATCCAGGTCAAGGAAGTCAAGTTCCGCCCGGGTACCGAT
GACGGGGACTACAACGTCAAGCTCCGCAATCTCGTGCGCTTCCTCGAAGAGGGCGACAAGACGAAGATCACGTTGCGTTT
CCGCGGCCGTGAAATGGCTCACCAGGAAATCGGTATGCGGATGCTTGAGCGTCTGCGCACGGATCTCGAGGAAGTCGGCC
AGGTTGAGCAGATGCCGAAGATGGAAGGGCGCCAGATGATCATGGTGCTCTCGCCGAAGAAAAAGAAGTAA

Upstream 100 bases:

>100_bases
CCCTGGCAGCGCGGCTCGTTTTTTTAATTTTTAGAGGAAACGTAACATCGCTACTGATAAGTCGTCGCATCGCATCAACG
GTGAAATCACTGCGCCGGAA

Downstream 100 bases:

>100_bases
CGGGCCCGCGCGCTTCGCGCGCAGGTTCGCAGCGGTTCGGCGCGTTGCCCGGTCAGGGCGGCGTGCCAACAATGACGGCG
GCTGCGCAAGCGGTTGCCGT

Product: translation initiation factor 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD
DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK

Sequences:

>Translated_156_residues
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD
DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK
>Mature_156_residues
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHEAKLKQKVIQVKEVKFRPGTD
DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=157, Percent_Identity=69.4267515923567, Blast_Score=206, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 18214; Mature: 18214

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHE
CEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHH
AKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMR
HHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
MLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQAVPPVCRLMDYGKFKYQESKKQHE
CEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHH
AKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMR
HHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
MLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]