Click here to switch to the map view.

The map label for this gene is iolH [H]

Identifier: 78066042

GI number: 78066042

Start: 1545955

End: 1546866

Strand: Direct

Name: iolH [H]

Synonym: Bcep18194_A4571

Alternate gene names: 78066042

Gene position: 1545955-1546866 (Clockwise)

Preceding gene: 78066041

Following gene: 78066043

Centisome position: 41.85

GC content: 68.09

Gene sequence:

>912_bases
ATGAAGATCGCGCTGGACCCCTACATGATTCGCCACCTGCCGCTCGACCGCCTGCCGCACGCGGTGGCCGAGCTCGGCTA
CGACCAGATCGAGCTGTCGCCGCGCAGCGACTTTCTCGACTGGTGGGTGATGCCGCGCGCGACGCGTGAGCGGATGGCCG
CGTTCCGGCAGGCGATGCGCGCGAGCGGCGTCGGCCTCGCTTCGCTGCAGCCGATGTACCGCTGGGCGAGCCCGTTCGAG
GACGAGCGGCAATGGGCGGTGCGCTGCTGGAAGAAGGCGATCGAGGTGGCGGTCGAGATGGAGTGCGCGCTGATGGTGTC
GGAGTTCGGGCGCGGCGCGTCGCCCGAGCGCTCGGTCGGCGAACGGCCGGGCGCGAACCCGAAGGAACTGTGCGAAGCCG
CGTGGTTCCGGTCGATGGACGAGCTGCTGCCGATCCTCGAGCGCGAACGCATCGTGCTGTCGGTCGAGCCGCATCCGGAG
GACTGGATCGAGCAGCTGCAGCCCGCGATGGACATCGTCACGAATATCGGCTCGCCGTCGCTGAAGCTGTCGTACATCGC
GCCGCACACGTTCTACTACGGCGACGACATGGCCGCGATGATCGCGCAGGCCGCGCCGATCCTCGCACACGTGCGCGTGG
CCGACACCTTCGACCACCGCAAGAGCAGCCAGCTGCGCTACATCGTGAACCCACCGGGTTCGAACCAGATCCGCGTGCAC
CAGCATCTCGACATCGGGCAGGGCGAGATCGACTGGGACGTGTTCTTTCGCGCGCTCGGCGCGGCAGGCTTCGACGGCGT
GATGTCGTCGTGCGTGTTCGCGTGGGAGGACCGCGCGGAAGCGTCGTCGCGCTACATGCGCGACGCGATCCAGCGCTACG
TCGATCGTCATTTCGATCGCACGGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCAACAAGAAGAAGCGCCGCTGACCCGTCAAGCATCGTCGGGCGAGGGCGGCACGTGCCGCCGCCTTGGTCCGGCACCC
GCCACCGTCGAGGACATTCG

Downstream 100 bases:

>100_bases
CGAATGACTGACCGGTGCGGCGCGTGCCGCACCGCCAATGAACGACTGGAGACTTTTAGATGACCTTGCAAATCGGCGTG
ATCGGCTGCGGTGCGATCGG

Product: xylose isomerase-like TIM barrel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKIALDPYMIRHLPLDRLPHAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFRQAMRASGVGLASLQPMYRWASPFE
DERQWAVRCWKKAIEVAVEMECALMVSEFGRGASPERSVGERPGANPKELCEAAWFRSMDELLPILERERIVLSVEPHPE
DWIEQLQPAMDIVTNIGSPSLKLSYIAPHTFYYGDDMAAMIAQAAPILAHVRVADTFDHRKSSQLRYIVNPPGSNQIRVH
QHLDIGQGEIDWDVFFRALGAAGFDGVMSSCVFAWEDRAEASSRYMRDAIQRYVDRHFDRTAR

Sequences:

>Translated_303_residues
MKIALDPYMIRHLPLDRLPHAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFRQAMRASGVGLASLQPMYRWASPFE
DERQWAVRCWKKAIEVAVEMECALMVSEFGRGASPERSVGERPGANPKELCEAAWFRSMDELLPILERERIVLSVEPHPE
DWIEQLQPAMDIVTNIGSPSLKLSYIAPHTFYYGDDMAAMIAQAAPILAHVRVADTFDHRKSSQLRYIVNPPGSNQIRVH
QHLDIGQGEIDWDVFFRALGAAGFDGVMSSCVFAWEDRAEASSRYMRDAIQRYVDRHFDRTAR
>Mature_303_residues
MKIALDPYMIRHLPLDRLPHAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFRQAMRASGVGLASLQPMYRWASPFE
DERQWAVRCWKKAIEVAVEMECALMVSEFGRGASPERSVGERPGANPKELCEAAWFRSMDELLPILERERIVLSVEPHPE
DWIEQLQPAMDIVTNIGSPSLKLSYIAPHTFYYGDDMAAMIAQAAPILAHVRVADTFDHRKSSQLRYIVNPPGSNQIRVH
QHLDIGQGEIDWDVFFRALGAAGFDGVMSSCVFAWEDRAEASSRYMRDAIQRYVDRHFDRTAR

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 34695; Mature: 34695

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIALDPYMIRHLPLDRLPHAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFRQAMR
CEEECCHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHH
ASGVGLASLQPMYRWASPFEDERQWAVRCWKKAIEVAVEMECALMVSEFGRGASPERSVG
HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ERPGANPKELCEAAWFRSMDELLPILERERIVLSVEPHPEDWIEQLQPAMDIVTNIGSPS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
LKLSYIAPHTFYYGDDMAAMIAQAAPILAHVRVADTFDHRKSSQLRYIVNPPGSNQIRVH
EEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE
QHLDIGQGEIDWDVFFRALGAAGFDGVMSSCVFAWEDRAEASSRYMRDAIQRYVDRHFDR
ECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAR
CCC
>Mature Secondary Structure
MKIALDPYMIRHLPLDRLPHAVAELGYDQIELSPRSDFLDWWVMPRATRERMAAFRQAMR
CEEECCHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHH
ASGVGLASLQPMYRWASPFEDERQWAVRCWKKAIEVAVEMECALMVSEFGRGASPERSVG
HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ERPGANPKELCEAAWFRSMDELLPILERERIVLSVEPHPEDWIEQLQPAMDIVTNIGSPS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
LKLSYIAPHTFYYGDDMAAMIAQAAPILAHVRVADTFDHRKSSQLRYIVNPPGSNQIRVH
EEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE
QHLDIGQGEIDWDVFFRALGAAGFDGVMSSCVFAWEDRAEASSRYMRDAIQRYVDRHFDR
ECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 1761221 [H]