| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is nudH [C]
Identifier: 78066019
GI number: 78066019
Start: 1519688
End: 1520158
Strand: Direct
Name: nudH [C]
Synonym: Bcep18194_A4548
Alternate gene names: 78066019
Gene position: 1519688-1520158 (Clockwise)
Preceding gene: 78066018
Following gene: 78066021
Centisome position: 41.14
GC content: 67.09
Gene sequence:
>471_bases ATGAAGCGGGGCGGCGCGCCGCGCACGGTGTCGTGCGGCGTCGTGATCCTCGATGGGGCCGGCCGCGTGTTCCTCGCGCA TGCGACGGATACCACGCACTGGGATATCCCGAAGGGGCAGGGCGAGCCGGGCGAGTCGCCGGCCGACGCGGCGCTGCGTG AACTGCTTGAGGAAACCGGTCTCGTGTTCGGCGCCGATCGGCTGCTCGATCTTGGCCGCTTCGCGTACCGGCACGACAAG GATCTTCACCTGTTCGCGGTGTGCGTGGCCGACGATGAAGTCGATCTCGCGCACTGCACGTGCACGTCGCTGTTCCCGAG TCGTCGCGACGGCTCGATGATTCCCGAGATGGATGCGTATCGCTGGACCGTGCCCGGCGACATCGATGCGTTTGCAAGCC GCAGCCTCGCGCGGCTGTTTCGCACGAAGCTGTCGCTGGTGGAGTTGCATCGGCGGCTGATGGGCGGGTAA
Upstream 100 bases:
>100_bases CCGAAATCACCGCAAAGGGCCAGACGATGACGCTCAAGCCCGTCTATTGCAAGACCGACGCGGGCAAGTGGCAGCTGCAG AAGCGCTGAGCACGCGGGTG
Downstream 100 bases:
>100_bases CGAGCGACGGCTTCCGTTGCCATGTGCCCTGGCTTCGCTTCATGGCACGCAACAAAAAACCGGCCCTGGGGCCGGTTTTT TCATGGTCACGCGACGGTGG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; Hydrolase Nudix Family; Phosphohydrolase; NUDIX Family Hydrolase; NUDIX Domain Protein
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKRGGAPRTVSCGVVILDGAGRVFLAHATDTTHWDIPKGQGEPGESPADAALRELLEETGLVFGADRLLDLGRFAYRHDK DLHLFAVCVADDEVDLAHCTCTSLFPSRRDGSMIPEMDAYRWTVPGDIDAFASRSLARLFRTKLSLVELHRRLMGG
Sequences:
>Translated_156_residues MKRGGAPRTVSCGVVILDGAGRVFLAHATDTTHWDIPKGQGEPGESPADAALRELLEETGLVFGADRLLDLGRFAYRHDK DLHLFAVCVADDEVDLAHCTCTSLFPSRRDGSMIPEMDAYRWTVPGDIDAFASRSLARLFRTKLSLVELHRRLMGG >Mature_156_residues MKRGGAPRTVSCGVVILDGAGRVFLAHATDTTHWDIPKGQGEPGESPADAALRELLEETGLVFGADRLLDLGRFAYRHDK DLHLFAVCVADDEVDLAHCTCTSLFPSRRDGSMIPEMDAYRWTVPGDIDAFASRSLARLFRTKLSLVELHRRLMGG
Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 17124; Mature: 17124
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGGAPRTVSCGVVILDGAGRVFLAHATDTTHWDIPKGQGEPGESPADAALRELLEETG CCCCCCCCEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC LVFGADRLLDLGRFAYRHDKDLHLFAVCVADDEVDLAHCTCTSLFPSRRDGSMIPEMDAY CEECHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCE RWTVPGDIDAFASRSLARLFRTKLSLVELHRRLMGG EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRGGAPRTVSCGVVILDGAGRVFLAHATDTTHWDIPKGQGEPGESPADAALRELLEETG CCCCCCCCEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC LVFGADRLLDLGRFAYRHDKDLHLFAVCVADDEVDLAHCTCTSLFPSRRDGSMIPEMDAY CEECHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCE RWTVPGDIDAFASRSLARLFRTKLSLVELHRRLMGG EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA