| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066014
Identifier: 78066014
GI number: 78066014
Start: 1513814
End: 1515292
Strand: Direct
Name: 78066014
Synonym: Bcep18194_A4543
Alternate gene names: NA
Gene position: 1513814-1515292 (Clockwise)
Preceding gene: 78066013
Following gene: 78066015
Centisome position: 40.98
GC content: 67.41
Gene sequence:
>1479_bases ATGAGCTTGCAGGGGGAGCGGCCGCATCGCGGCCGCCGCTTCGATCGTGCCGCACGCGTGTCCGTCGTCGCGGGGCTGCT GCTCGCCGGGCGCGGCGTGGCGTTCGCGCAAACGTCGCCGGCATCGGCTTCGGCACCGGCCACGGACGGCACCGCATCGA CGTGCACGGCCAAGCGGCCGACCGTGCTGTTCAACCGCTGGCAGGAAGACTGGTCGGTGCTCGCGAATCCGTGCGTGCCG CGCGCACCGCTCGACGGCTTGAAATACATTCCGCTGGGAAACGATCCGGCCTCCTATCTGTCGCTCGGCGTGAACCTGCG CGAGCGTCTCGAGACCAACGACGCGCCACTGTTCGGCATCGGATCCGCGCAATCGGATACGTACCTGATCCAGCGCGTCG AAGTGCATGCCGATGCGCATCTCGGCCAGCACTGGCAGTTCTTCGTGCAGTTGCAGGACGACCGCGCGTTCGGCAAGAAC ACGATCTCGCCGGTCGACAAGAATCCGCTCGATCTCGAACAGGCATTCGCGACCTACACGGGCGCGCTCGGCGGCGGCAC GTTCAAGTTCCGCGTCGGCCGGCAGGAGATGGCGTTCGACTTGCAGCGCTTCATCGCCGCGCGCGACGGTCCGAACGTGC GGCAGGCGTTCGATGCGCTATGGGCCGACTACGAATACCAGAAGTGGCGTTTCATCGCGTATGCGACCCAGCCGGTGCAG AACCGCAGCGTGTCCACGTTCGATGATGTGTCGAACCGCGACCTCACGTTCAGCGGCGTGCGCTTCGAGCGGCAGTCGGT GGGGCCCGGCGACCTGTCGGGCTACTGGTCGCGCTACAACCGCAGCAACGCGCGCTTTCTGGATGCGAGCGGTGCCGAGC GTCGCGACGTGTGGGACCTGCGTTACACCGGGACGCAAGGCCGCTTCGACTGGGATCTCGAAACGATGCTGCAGACGGGT ACGGTCGGCAGCAGCACGATCCGCGCGTGGGCGGTCGGCTCGATCGCCGGCTACCGGCTCGACGCGCCGTGGTCGCCACG CATCGCGCTGCAGGTCGACGCGGCGTCGGGCGACCGGCATCCGCATGACGGCCGTGTCGAAACCTTCAACCCGCTGTTTC CGAACGGCTATTACTTCACGCTGGCCGGCTTCACCGGGTATTCGAACCTGATCCACGTGAAGCCGTCGGTGACGTTGAAG CCGTCGCCGAACCTGTCGCTGCTCGGCGCGCTCGGGTTCCAGTGGCGCGAGACGACCGGCGATGCGGTCTACCAGCAGGG CAACGCGGTGGTGCCGGGCACGGCGGGCAAGGGCGGGCTGTGGACCGGGATGTACGTGCAGCTGCGGGCGGACTGGACGA TCGCCGCGAACCTGATCGGTGCGATCGAGGCCGTGCATTTCCAGGTCGGCGATGCGATCCGCCAGGCGGGCGGGCACAAC GCCGACTACGTCGGGGTCGAGCTGAAGTATGGGTGGTAG
Upstream 100 bases:
>100_bases GCACTATCGGCTTTCTGGCGCTGCTCGCGCCGGTCTGCGCGCTTGCGGTGCTCGCGCTGTGCGCGGCGCAATCCGCCGGT GCGGTTGCGAAGGAGCGCGC
Downstream 100 bases:
>100_bases CCCGCGTGTCGCGGCGCGTCCGTCGGCGAATCGCTGCCTGATGCGTGGTGTCGAATGAAGGCGCGTGTGCAGGTGCTCGC TTTTTCGGACGAGATGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSLQGERPHRGRRFDRAARVSVVAGLLLAGRGVAFAQTSPASASAPATDGTASTCTAKRPTVLFNRWQEDWSVLANPCVP RAPLDGLKYIPLGNDPASYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAHLGQHWQFFVQLQDDRAFGKN TISPVDKNPLDLEQAFATYTGALGGGTFKFRVGRQEMAFDLQRFIAARDGPNVRQAFDALWADYEYQKWRFIAYATQPVQ NRSVSTFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRSNARFLDASGAERRDVWDLRYTGTQGRFDWDLETMLQTG TVGSSTIRAWAVGSIAGYRLDAPWSPRIALQVDAASGDRHPHDGRVETFNPLFPNGYYFTLAGFTGYSNLIHVKPSVTLK PSPNLSLLGALGFQWRETTGDAVYQQGNAVVPGTAGKGGLWTGMYVQLRADWTIAANLIGAIEAVHFQVGDAIRQAGGHN ADYVGVELKYGW
Sequences:
>Translated_492_residues MSLQGERPHRGRRFDRAARVSVVAGLLLAGRGVAFAQTSPASASAPATDGTASTCTAKRPTVLFNRWQEDWSVLANPCVP RAPLDGLKYIPLGNDPASYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAHLGQHWQFFVQLQDDRAFGKN TISPVDKNPLDLEQAFATYTGALGGGTFKFRVGRQEMAFDLQRFIAARDGPNVRQAFDALWADYEYQKWRFIAYATQPVQ NRSVSTFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRSNARFLDASGAERRDVWDLRYTGTQGRFDWDLETMLQTG TVGSSTIRAWAVGSIAGYRLDAPWSPRIALQVDAASGDRHPHDGRVETFNPLFPNGYYFTLAGFTGYSNLIHVKPSVTLK PSPNLSLLGALGFQWRETTGDAVYQQGNAVVPGTAGKGGLWTGMYVQLRADWTIAANLIGAIEAVHFQVGDAIRQAGGHN ADYVGVELKYGW >Mature_491_residues SLQGERPHRGRRFDRAARVSVVAGLLLAGRGVAFAQTSPASASAPATDGTASTCTAKRPTVLFNRWQEDWSVLANPCVPR APLDGLKYIPLGNDPASYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAHLGQHWQFFVQLQDDRAFGKNT ISPVDKNPLDLEQAFATYTGALGGGTFKFRVGRQEMAFDLQRFIAARDGPNVRQAFDALWADYEYQKWRFIAYATQPVQN RSVSTFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRSNARFLDASGAERRDVWDLRYTGTQGRFDWDLETMLQTGT VGSSTIRAWAVGSIAGYRLDAPWSPRIALQVDAASGDRHPHDGRVETFNPLFPNGYYFTLAGFTGYSNLIHVKPSVTLKP SPNLSLLGALGFQWRETTGDAVYQQGNAVVPGTAGKGGLWTGMYVQLRADWTIAANLIGAIEAVHFQVGDAIRQAGGHNA DYVGVELKYGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54189; Mature: 54058
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQGERPHRGRRFDRAARVSVVAGLLLAGRGVAFAQTSPASASAPATDGTASTCTAKRP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC TVLFNRWQEDWSVLANPCVPRAPLDGLKYIPLGNDPASYLSLGVNLRERLETNDAPLFGI HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHCCCCCCEEEE GSAQSDTYLIQRVEVHADAHLGQHWQFFVQLQDDRAFGKNTISPVDKNPLDLEQAFATYT CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH GALGGGTFKFRVGRQEMAFDLQRFIAARDGPNVRQAFDALWADYEYQKWRFIAYATQPVQ CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC NRSVSTFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRSNARFLDASGAERRDVWDL CCCCCCHHCCCCCCEEEECEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEE RYTGTQGRFDWDLETMLQTGTVGSSTIRAWAVGSIAGYRLDAPWSPRIALQVDAASGDRH EEECCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCEEEEEEECCCCCCC PHDGRVETFNPLFPNGYYFTLAGFTGYSNLIHVKPSVTLKPSPNLSLLGALGFQWRETTG CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEECCCCCEEEEEECCCEEECCCC DAVYQQGNAVVPGTAGKGGLWTGMYVQLRADWTIAANLIGAIEAVHFQVGDAIRQAGGHN CHHHHCCCEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ADYVGVELKYGW CCEEEEEEEECC >Mature Secondary Structure SLQGERPHRGRRFDRAARVSVVAGLLLAGRGVAFAQTSPASASAPATDGTASTCTAKRP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC TVLFNRWQEDWSVLANPCVPRAPLDGLKYIPLGNDPASYLSLGVNLRERLETNDAPLFGI HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHCCCCCCEEEE GSAQSDTYLIQRVEVHADAHLGQHWQFFVQLQDDRAFGKNTISPVDKNPLDLEQAFATYT CCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH GALGGGTFKFRVGRQEMAFDLQRFIAARDGPNVRQAFDALWADYEYQKWRFIAYATQPVQ CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC NRSVSTFDDVSNRDLTFSGVRFERQSVGPGDLSGYWSRYNRSNARFLDASGAERRDVWDL CCCCCCHHCCCCCCEEEECEEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCEEEE RYTGTQGRFDWDLETMLQTGTVGSSTIRAWAVGSIAGYRLDAPWSPRIALQVDAASGDRH EEECCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCEEEEEEECCCCCCC PHDGRVETFNPLFPNGYYFTLAGFTGYSNLIHVKPSVTLKPSPNLSLLGALGFQWRETTG CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEECCCCCEEEEEECCCEEECCCC DAVYQQGNAVVPGTAGKGGLWTGMYVQLRADWTIAANLIGAIEAVHFQVGDAIRQAGGHN CHHHHCCCEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ADYVGVELKYGW CCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA