| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065987
Identifier: 78065987
GI number: 78065987
Start: 1480801
End: 1481625
Strand: Direct
Name: 78065987
Synonym: Bcep18194_A4516
Alternate gene names: NA
Gene position: 1480801-1481625 (Clockwise)
Preceding gene: 78065986
Following gene: 78065990
Centisome position: 40.09
GC content: 65.94
Gene sequence:
>825_bases ATGACAGTCCCGCACCGGAACAAACGTCTGAAGCCGCTTGCGGCTTCGCTCGCCGCACTTGGCGCACTCGCGGTGCTGAC CGCACTTTCCGCGATGTCACCTGTCTATGCGGCCGAGCCGGTCCAGCCTGACCATCAACTGAAAACCTTCATCCACGACA CTTATGGCAAGTGGCGTGCGGACCGCAAGGGCTGGCAGGCGGACGGGGACGATCTGATCTATGCGCCATGCGGTTCGGTG CGCGTCGCGACCGCGGATGGCCCGCGCACGCTACTCGCGATGTGCGGCGAGACCGAGGCGGCGGTGCAGAACGGGATGCC GGGGATGGATTCGGACGCGACGACCGGCACGATCGACCTGTACGTGCTGAAACCAACGGCGGACGGCAGGACGCTCGAAC CGGTGGTGAAGAAGACGGAGATCGCGTCGGGCAAGCGAGGCGAACCGGGCACCGTGCGCATCGAGCGGTACGGCCCGCAC CTGTTCGGCTTCACGATCGGCGACGGCGTCACGCTGCAGGGCTACACGATGGCGATGCGGTCGATCTGGCTGCCGATTGG CAATGCGATCGTCGAGGCGGCGCCGCGCATCAACGAATCGCTCGACAACACGGGCTCGCTCGATTGCGGGAACGCGAAAT CGCATTGCGAGAGCCGGACGTTCACGATCGTGCCCGACACGACCGGCACCGGCGACGTCTATCCGCTGACCGTCACGGAA ACGGGCACGCGCGGCGACAAGGACATCCGCGCGCGCTATACGGTGAAGTTCGACGCGGCGCGTGGCCGCTACGTCGTGCC GAAGGCATTGCGCGAAGGGTACTGA
Upstream 100 bases:
>100_bases GGCTGAAGCCGGACGGCACCGGCATCGCGCCACGGCAGCCGTGATCGTGCGGGCCCGCCACCATTCGCTACACACCTTTT CGACCTGAACGATCCTCGTC
Downstream 100 bases:
>100_bases TCCTTCGCGCACCGGAACGGGCGGCGTTGCGCCGCCCGCGCATCACACGTACAGATACCGCACGAGGTGGAAGAACACCG GCGCGGCGAAGCAGATCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRADRKGWQADGDDLIYAPCGSV RVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDLYVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPH LFGFTIGDGVTLQGYTMAMRSIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY
Sequences:
>Translated_274_residues MTVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRADRKGWQADGDDLIYAPCGSV RVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDLYVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPH LFGFTIGDGVTLQGYTMAMRSIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY >Mature_273_residues TVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRADRKGWQADGDDLIYAPCGSVR VATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDLYVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPHL FGFTIGDGVTLQGYTMAMRSIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTET GTRGDKDIRARYTVKFDAARGRYVVPKALREGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29444; Mature: 29313
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC DRKGWQADGDDLIYAPCGSVRVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDL CCCCCCCCCCCEEEECCCCEEEEECCCCCEEHHHCCCCHHHHHCCCCCCCCCCCCCEEEE YVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPHLFGFTIGDGVTLQGYTMAMR EEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCEEECHHHHHHH SIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE HHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEEEEEC TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY CCCCCCCCEEEEEEEEEECCCCCEECHHHHHCCC >Mature Secondary Structure TVPHRNKRLKPLAASLAALGALAVLTALSAMSPVYAAEPVQPDHQLKTFIHDTYGKWRA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC DRKGWQADGDDLIYAPCGSVRVATADGPRTLLAMCGETEAAVQNGMPGMDSDATTGTIDL CCCCCCCCCCCEEEECCCCEEEEECCCCCEEHHHCCCCHHHHHCCCCCCCCCCCCCEEEE YVLKPTADGRTLEPVVKKTEIASGKRGEPGTVRIERYGPHLFGFTIGDGVTLQGYTMAMR EEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCEEECHHHHHHH SIWLPIGNAIVEAAPRINESLDNTGSLDCGNAKSHCESRTFTIVPDTTGTGDVYPLTVTE HHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEEEEEC TGTRGDKDIRARYTVKFDAARGRYVVPKALREGY CCCCCCCCEEEEEEEEEECCCCCEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA