| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065982
Identifier: 78065982
GI number: 78065982
Start: 1476372
End: 1477730
Strand: Direct
Name: 78065982
Synonym: Bcep18194_A4511
Alternate gene names: NA
Gene position: 1476372-1477730 (Clockwise)
Preceding gene: 78065981
Following gene: 78065983
Centisome position: 39.97
GC content: 71.23
Gene sequence:
>1359_bases ATGACAGCAAAGCAACCTGAACGGCGCGTGCGCATCGGCGCGGGCGCCGGCTACTCGGGCGACCGGATCGAGCCGGCGGT CGAACTGGCCGAACACGGGCAGCTCGACTATCTGGTGTTCGAATGCCTGGCCGAGCGCACGATCGCGATCGCGCAGCAGG CGCGGCGCAAGGACCCGGCACTCGGCTACGACCCGCTGCTCGACGCGCGGATGCACGCGGTGCTGCCGGTCGCCGCGCCG AAGGGCGTGCGCATCGTGTCGAACATGGGCGCGGCGAATCCGCGCGCGGCCGCACGGCGCACCGCGCAGATCGCGCAATC GCTCGGTTTCGCACAGCTGAAGGTCGCGGCGGTCGAAGGCGACGACGTGCTCGACGTGGTGCTGCGCGGCGCGTTCCGCT TCGAGGAATCGGGCGACGACGTCGCCGCGTATCGCGAGCGCATCGTGTCCGCGAATGCGTACCTCGGCGCCGCGCCGATC GTCGATGCGCTCGCGGCCGGCGCCGATGTCGTGCTGACCGGGCGCGTCGCCGATCCGTCGCTGTTCGCCGCGCCGCTGAT CCACGCGTTCGGCTGGCGGATGGATGACTGGGACACGCTTGGCGCCGCGACGGTCGTCGGCCACCTGCTCGAATGCGCGG GGCAGGTGACGGGCGGCTATTTCGCGGATCCCGGCTACAAGGACGTGCCGAACCTCGCGCGGCTCGGGTTTCCGATCGGC GAAGTCGCGTCCGACGGTTCGGTCGTGATCACGAAGGTGCCGCACGCGGGCGGCCGCGTGAGCGCGGCGACCTGCAAGGA ACAGCTGCTCTACGAGATTCACGACCCGGCGCGGTACTTGCAGCCCGACGTCGTCGCGGATTTCACCCGCGTGGCGGTCG TGGAGGAGGCGACCGATCGCGTGCGTGTGACGGGCGGGCGTGGCACGGCGCGGCCCGACACGCTGAAGGTGTCGGTGGCT TACGTCGACGGCTGGATCGGCGAAGGCCAGATCTCGTACGGCGGCCCGGGTGCGCTCGAACGCGCGCGCTTCGCGCTCGA GATTGTCCGCGAACGGCTGGCACTGACAGGCGTTGCCGCGACCGAGTTGCGCTTCGACCTGATCGGCGTCGATGCGCTGT ACGGCGACGCAACGCCGGCCGTGCACGGCGAGCCGGCCGAGGTGCGCGTGCGGGTGGCAGGCCGTGCGGCGAGCGCCGCC GAAGCGGCGCGCATCGGCAACGAAGTCGAGACGCTCTATACGAACGGGCCGGCCGGCGGCGGCGGCGCGTTCAAGTCGAC GCGCGAGGTGATCGCCGTGCAGTCGGTGCTGCTGCCGCGCGCGGCCGTGACGCCGTCGTTTTCATTCGTGGAGGCATGA
Upstream 100 bases:
>100_bases GCTGCTGTTCGGCGCCTCGATCGTGATGACGATCGCGTGCGTCGTGCTGGGCATCTTTTGATCTTTCCCGGCGGTGCACC CGCCGGACGACGGTACGGAC
Downstream 100 bases:
>100_bases TGCAACTGCGTGAACTGGCGCATGCGCGCACCGGCGACAAGGGCAATACGCTGAACGTATCGGTGATCTGCCACGATCCG CGCCATTACGATCATCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPALGYDPLLDARMHAVLPVAAP KGVRIVSNMGAANPRAAARRTAQIAQSLGFAQLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRERIVSANAYLGAAPI VDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPNLARLGFPIG EVASDGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVVEEATDRVRVTGGRGTARPDTLKVSVA YVDGWIGEGQISYGGPGALERARFALEIVRERLALTGVAATELRFDLIGVDALYGDATPAVHGEPAEVRVRVAGRAASAA EAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
Sequences:
>Translated_452_residues MTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPALGYDPLLDARMHAVLPVAAP KGVRIVSNMGAANPRAAARRTAQIAQSLGFAQLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRERIVSANAYLGAAPI VDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPNLARLGFPIG EVASDGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVVEEATDRVRVTGGRGTARPDTLKVSVA YVDGWIGEGQISYGGPGALERARFALEIVRERLALTGVAATELRFDLIGVDALYGDATPAVHGEPAEVRVRVAGRAASAA EAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA >Mature_451_residues TAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPALGYDPLLDARMHAVLPVAAPK GVRIVSNMGAANPRAAARRTAQIAQSLGFAQLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRERIVSANAYLGAAPIV DALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPNLARLGFPIGE VASDGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVVEEATDRVRVTGGRGTARPDTLKVSVAY VDGWIGEGQISYGGPGALERARFALEIVRERLALTGVAATELRFDLIGVDALYGDATPAVHGEPAEVRVRVAGRAASAAE AARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47517; Mature: 47386
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPA CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LGYDPLLDARMHAVLPVAAPKGVRIVSNMGAANPRAAARRTAQIAQSLGFAQLKVAAVEG CCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECC DDVLDVVLRGAFRFEESGDDVAAYRERIVSANAYLGAAPIVDALAAGADVVLTGRVADPS CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCH LFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPNLARLGFPIG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCHH EVASDGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVVEEATDR HHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCC VRVTGGRGTARPDTLKVSVAYVDGWIGEGQISYGGPGALERARFALEIVRERLALTGVAA EEEECCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCH TELRFDLIGVDALYGDATPAVHGEPAEVRVRVAGRAASAAEAARIGNEVETLYTNGPAGG HHEEEEEEEEEHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCC GGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA CCCHHHHHHHHHHHHHHHCHHHCCCCCHHCCC >Mature Secondary Structure TAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRKDPA CCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LGYDPLLDARMHAVLPVAAPKGVRIVSNMGAANPRAAARRTAQIAQSLGFAQLKVAAVEG CCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECC DDVLDVVLRGAFRFEESGDDVAAYRERIVSANAYLGAAPIVDALAAGADVVLTGRVADPS CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCH LFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPNLARLGFPIG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCHH EVASDGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVAVVEEATDR HHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCC VRVTGGRGTARPDTLKVSVAYVDGWIGEGQISYGGPGALERARFALEIVRERLALTGVAA EEEECCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCH TELRFDLIGVDALYGDATPAVHGEPAEVRVRVAGRAASAAEAARIGNEVETLYTNGPAGG HHEEEEEEEEEHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCC GGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA CCCHHHHHHHHHHHHHHHCHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA