| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78065890
Identifier: 78065890
GI number: 78065890
Start: 1377107
End: 1377628
Strand: Direct
Name: 78065890
Synonym: Bcep18194_A4419
Alternate gene names: NA
Gene position: 1377107-1377628 (Clockwise)
Preceding gene: 78065889
Following gene: 78065891
Centisome position: 37.28
GC content: 70.5
Gene sequence:
>522_bases ATGGCGCCCGCCATGAGACCAGCCGCCTTCCTTCTCGCCGCGCTTTGCTGCGCGGCGAGCGCCCACGCCAGCCAGATTCC GTCCGACGCCGCATCGGTCGGCACATACTTTTCGTATGACAATGCAGCGGCCGACGCGACCGTCGACCTGATCGGCCAGG CCCAACGCCGGGTGCTGCTGGCAGGCTATGCGCACGTGCCGCCGGCGGTCGCGAGCGCGCTGCGCGCGGCCCGCGCGCGC GGGGTCGAGGTGCGTGTCGTGCTCGTGCGTTCGCCGCGCGCGGGCAGATACAGCGGCGCGGGCTATCTGAAATCCTCGGG TATCGACGTGGCGATCGATTCGCGGCACGGCGATCCCGCGCCGCGCTTCGTGATCGTCGACGACAGCGTCGCGCTGACGA CGCTGTCCGAAGGCGCAGCCGCGCATGCGGAAACGGTGAACGTGTTCCAGCGCGCGCCCGAGCTTGCGCAATCCTATGCG CAGTCGTTCTGGCGGCTGTACCGGCAGGCCGGCGGCCTCTGA
Upstream 100 bases:
>100_bases GGGCTGTAACCCGTTCGCCGGGCACCGGTTTTGCGCTGTGTGTTGCGCCGGCGCAGCAGCATCGCAGCCGGTGCTTGCCA CGCGAATTGGCGTCGCTACA
Downstream 100 bases:
>100_bases CCCTTTCCGTCGGCGTCGCGCGCGCCGGTGTGACCCTGCTTGCATCGGTGCGGCCGATGAACCATGCTCGTTGACAGGCG CCGGCGCGGGTTTCGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAPAMRPAAFLLAALCCAASAHASQIPSDAASVGTYFSYDNAAADATVDLIGQAQRRVLLAGYAHVPPAVASALRAARAR GVEVRVVLVRSPRAGRYSGAGYLKSSGIDVAIDSRHGDPAPRFVIVDDSVALTTLSEGAAAHAETVNVFQRAPELAQSYA QSFWRLYRQAGGL
Sequences:
>Translated_173_residues MAPAMRPAAFLLAALCCAASAHASQIPSDAASVGTYFSYDNAAADATVDLIGQAQRRVLLAGYAHVPPAVASALRAARAR GVEVRVVLVRSPRAGRYSGAGYLKSSGIDVAIDSRHGDPAPRFVIVDDSVALTTLSEGAAAHAETVNVFQRAPELAQSYA QSFWRLYRQAGGL >Mature_172_residues APAMRPAAFLLAALCCAASAHASQIPSDAASVGTYFSYDNAAADATVDLIGQAQRRVLLAGYAHVPPAVASALRAARARG VEVRVVLVRSPRAGRYSGAGYLKSSGIDVAIDSRHGDPAPRFVIVDDSVALTTLSEGAAAHAETVNVFQRAPELAQSYAQ SFWRLYRQAGGL
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18056; Mature: 17924
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAMRPAAFLLAALCCAASAHASQIPSDAASVGTYFSYDNAAADATVDLIGQAQRRVLL CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEECCCCCCHHHHHHHHHHHHHHEEE AGYAHVPPAVASALRAARARGVEVRVVLVRSPRAGRYSGAGYLKSSGIDVAIDSRHGDPA ECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEECCCCEEEEECCCCCCC PRFVIVDDSVALTTLSEGAAAHAETVNVFQRAPELAQSYAQSFWRLYRQAGGL CEEEEEECCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APAMRPAAFLLAALCCAASAHASQIPSDAASVGTYFSYDNAAADATVDLIGQAQRRVLL CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEECCCCCCHHHHHHHHHHHHHHEEE AGYAHVPPAVASALRAARARGVEVRVVLVRSPRAGRYSGAGYLKSSGIDVAIDSRHGDPA ECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEECCCCEEEEECCCCCCC PRFVIVDDSVALTTLSEGAAAHAETVNVFQRAPELAQSYAQSFWRLYRQAGGL CEEEEEECCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA