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The map label for this gene is nhaR [H]

Identifier: 78065873

GI number: 78065873

Start: 1363607

End: 1364500

Strand: Reverse

Name: nhaR [H]

Synonym: Bcep18194_A4402

Alternate gene names: 78065873

Gene position: 1364500-1363607 (Counterclockwise)

Preceding gene: 78065876

Following gene: 78065872

Centisome position: 36.94

GC content: 72.04

Gene sequence:

>894_bases
ATGCTCAATTTCCGACATCTGTACTACTTCTGGGTCGTCGTGAAGGAAGGCGGCTTCGCGCGCGCGGCCGCGCGGCTCGA
CATGGCCGTGCAGACCATCAGTGCGCAGGTGCGCGAGCTCGAAAAAGCGCTCGGGCACCAGTTATTGCGCCCGGCCGGGC
GCGGCGTCACGATGACCGACGCCGGCCAGGCCGCGTTTGCGCGCGCGGAGGCGATCTTCGAAATGGGGCGGCTGATCCCC
GACGAAGTGCGCGCGGCGGCCAGCCAGCCGACCGTGCGGCTCGCGGTCGGCCTCGCGGACGGCATCTCCAAGCTCGCCGC
GCACGCGATCCTCGCGCCCGTGCTGGATACGCCCACGCTGCGGCTGCTGTGCCACGAAGGCGAGCACGATGCGCTGCTCG
CGGAGCTGGCGCTGCATCATCTCGACCTGGTGCTGGCCGGCCAGGGCGCGCCGTCCGGTTCGAACCTGCGCGTGACGAGC
GAGCGGCTCGTCGCGTCGCCGGTCGACTGGTATGGCCCCTCGGCGCTCGTCACGCCGGCCGCGCGGCAGCACTTTCCGCA
GTGCCTCGCCGACCTGCCCGTGCTGCTGCCGACCGCGCATTCTGCGCTGCGCGCGCGCCTCGACCTGTGGCTGGAAGGAG
AACGGATCCTGCCCCGTGTGGCCGGGGAGTTCGAGGACAGCGCGCTGATGGCCGTGTTCGCGGCGCGCGGCCTCGGCGTG
TTTCCGCTGAGCGAACTCGGCGCGAACGACGCGTCGCTGCTGCGCGGGTTGCGGCGGCTCGGGCGTGCCGGCGACGTGAC
CGAGGAGATCCACGCGATCCGCTCGCGGCGCGGCGAACACCATCCGCTGACGTCGCAATTGCTCGCCGCGGCACGCGGCG
CACCGGCCGACTGA

Upstream 100 bases:

>100_bases
CCGATACGAAAGTGGAAAGCCAGATCATATGCCGCCCCGGACTTCGGAAAAATCAGAGAGAATCTGACTTTTGGTTCGGT
TTTTCCGAAATTACGATCCG

Downstream 100 bases:

>100_bases
AGCGAGCGCGACATCAAAGGAAACTATAATGACGCCCCGGCCTTACGAGATGGCCGCGCGCTTCATCCTGGCTCCGCCCG
TTGCGCGACCTCTCGCCAAG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Na(+)/H(+) antiporter regulatory protein [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLNFRHLYYFWVVVKEGGFARAAARLDMAVQTISAQVRELEKALGHQLLRPAGRGVTMTDAGQAAFARAEAIFEMGRLIP
DEVRAAASQPTVRLAVGLADGISKLAAHAILAPVLDTPTLRLLCHEGEHDALLAELALHHLDLVLAGQGAPSGSNLRVTS
ERLVASPVDWYGPSALVTPAARQHFPQCLADLPVLLPTAHSALRARLDLWLEGERILPRVAGEFEDSALMAVFAARGLGV
FPLSELGANDASLLRGLRRLGRAGDVTEEIHAIRSRRGEHHPLTSQLLAAARGAPAD

Sequences:

>Translated_297_residues
MLNFRHLYYFWVVVKEGGFARAAARLDMAVQTISAQVRELEKALGHQLLRPAGRGVTMTDAGQAAFARAEAIFEMGRLIP
DEVRAAASQPTVRLAVGLADGISKLAAHAILAPVLDTPTLRLLCHEGEHDALLAELALHHLDLVLAGQGAPSGSNLRVTS
ERLVASPVDWYGPSALVTPAARQHFPQCLADLPVLLPTAHSALRARLDLWLEGERILPRVAGEFEDSALMAVFAARGLGV
FPLSELGANDASLLRGLRRLGRAGDVTEEIHAIRSRRGEHHPLTSQLLAAARGAPAD
>Mature_297_residues
MLNFRHLYYFWVVVKEGGFARAAARLDMAVQTISAQVRELEKALGHQLLRPAGRGVTMTDAGQAAFARAEAIFEMGRLIP
DEVRAAASQPTVRLAVGLADGISKLAAHAILAPVLDTPTLRLLCHEGEHDALLAELALHHLDLVLAGQGAPSGSNLRVTS
ERLVASPVDWYGPSALVTPAARQHFPQCLADLPVLLPTAHSALRARLDLWLEGERILPRVAGEFEDSALMAVFAARGLGV
FPLSELGANDASLLRGLRRLGRAGDVTEEIHAIRSRRGEHHPLTSQLLAAARGAPAD

Specific function: Plays a role in the positive regulation of nhaA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786202, Length=294, Percent_Identity=30.6122448979592, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1788297, Length=258, Percent_Identity=31.0077519379845, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31833; Mature: 31833

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFRHLYYFWVVVKEGGFARAAARLDMAVQTISAQVRELEKALGHQLLRPAGRGVTMTD
CCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
AGQAAFARAEAIFEMGRLIPDEVRAAASQPTVRLAVGLADGISKLAAHAILAPVLDTPTL
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCE
RLLCHEGEHDALLAELALHHLDLVLAGQGAPSGSNLRVTSERLVASPVDWYGPSALVTPA
EEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEHHHHHCCCCCCCCCCHHCCHH
ARQHFPQCLADLPVLLPTAHSALRARLDLWLEGERILPRVAGEFEDSALMAVFAARGLGV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC
FPLSELGANDASLLRGLRRLGRAGDVTEEIHAIRSRRGEHHPLTSQLLAAARGAPAD
CCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLNFRHLYYFWVVVKEGGFARAAARLDMAVQTISAQVRELEKALGHQLLRPAGRGVTMTD
CCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
AGQAAFARAEAIFEMGRLIPDEVRAAASQPTVRLAVGLADGISKLAAHAILAPVLDTPTL
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCE
RLLCHEGEHDALLAELALHHLDLVLAGQGAPSGSNLRVTSERLVASPVDWYGPSALVTPA
EEEEECCCHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEHHHHHCCCCCCCCCCHHCCHH
ARQHFPQCLADLPVLLPTAHSALRARLDLWLEGERILPRVAGEFEDSALMAVFAARGLGV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC
FPLSELGANDASLLRGLRRLGRAGDVTEEIHAIRSRRGEHHPLTSQLLAAARGAPAD
CCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2429258; 1630901; 9278503; 3413113; 1316901; 8168494 [H]