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The map label for this gene is kpsC [H]

Identifier: 78065331

GI number: 78065331

Start: 765430

End: 767280

Strand: Reverse

Name: kpsC [H]

Synonym: Bcep18194_A3857

Alternate gene names: 78065331

Gene position: 767280-765430 (Counterclockwise)

Preceding gene: 78065332

Following gene: 78065330

Centisome position: 20.77

GC content: 57.97

Gene sequence:

>1851_bases
ATGTCACGTTCACCGACGATCCATACGCACTCTTGGCCGAATGGCATCATGCCACGCAAAAAAGGGCCGGCGCTCTCGTG
GTTCACCACTTCCCTCGAATCTGAAACGGCCGATGGATGGATCGGCCGCATCGATGCCGAACTCGCGACCTTATCCGCAA
TCGGCTCGGCATTGAATATCACGCGGCTCGTGGAGCGATTCCGTGCCGCCAACGTATTCGATCCATCGAGCTGCGCCACG
CGTATTCCGCTCGGCTTGCTCGAGCGCGGCACCGCACAGCGAGTGCTGGTGCTCGACGAGCCCGCATCCGTCTATTTGCA
GGCACCGCGCAGAGAAAGGGAAAGGCAGTTTTCCCGAATGCTGGCCGCAGTGCACCGCGAGCAACCAGAGGCAGAAATTT
GGTTCGCCCGTAGTGGCATATCGAGTTCAGGAGAATGGCTTTCGTCGTCCCATCCAGGAATCCGCGGTTCGAATCGATAC
ATCGACACAAGCGAGTCACTCTGCGCTTCCCTCCCGTATTTCGACCACGTCTATACGCTCTCCGCAGTTGAAGGGATGCA
AGCGTTGCTTTGTGGCGTCCCGGTACATGTATTCGGTATGCCGTACTACGCTGGCTGGGGATTGACGCACGACGATGCGC
CCCAGCCGGCAAGGCAATCGCACGCGACTCTGGAATCATTGTTCGAAGTTGTGTTCATACGCCTTTCCCGTCATCTCGCC
CCTGCAGGAAAGACATCCGATTCGCTCGAAGCACTCCTTGACGCAATCGAAGCTCATCGCGCAACCGTATTACGCTTCGC
CGATATACGCCACGTAGCAGGCATCCGTTTCCAGTGGTGGAAACGACCCTTCGCTACTCCTTTCCTGACGGCCGGTGGCG
GAACACTGCGCTGGACGGATGACGCAAGCAAGCTTGCGGAAGGAGAGCATGCCGCATTTTGGGGTGCGCGTAGTACAGAG
GGCTTGCCACCCGACACACCGGCCGTCCGTATCGAGGACGGCTTCCTGCACTCGATCGGCCTCGGCTCAGACCACGTCGC
TCCATGCAGCCAGATAATCGACCGGCGCGGCCTCTATTTCGACCCGAGCCGCCCGAGCGACCTGACGGTGATCCTGAACG
AAACGGATTTCAATGAAACTGAACTCGCGCGGGCTGACGCATTGCGCAACGAGATCACCCGCCTAGGGTTGACAAAGTAC
AATCTCGGTCGCCGCAAGCCGGCTTGGCACGCGCCGCCGGGCAAGCGCGTTGTGCTCGTGCCGGGACAGGTCGCAGACGA
CGCGTCGATTCGACTCGGTACGCGCGGCATCACGACAACCGAAGAATTGCTGCGAACGGTACGCGCCCACAACCCGGACG
CATTTATTGTCTATAAACCCCATCCTGACGTCCTGTCGGGCAATCGCCGCGGCTTAATAGAAGCGGCAGCTCTCGCCGAC
GTGATGGAGCAGGACTCTGATCTGATTTCGCTGATTGAGATAGCGGATGAAGTGCACACGCTTTCTTCGCTGTCTGGTTT
TGAAGCGTTGATTCGCCGGAAAGCTGTCTTCACATATGGACTGCCCTTTTATGCAGGCTGGGGGTTGACACACGATGCGC
TCGCACCACCTTGGCGCGATCGCAAGCTCTCGCTCGATATGCTGACGGCAGGTGTATTGCTGCGCTACCCGATCTATTGG
GATTGGACTCTTCATCTGTTTACATCGCCCGAAGCCATCGTTCGAAAATTGGCGATACCTGCGAAACGCCCACTCGTGAA
AATTCGAGGTAATCGTTTGCGCCCACTTCTAAAAGCAATTCGTTGGAGCAGGAATGGACTCCAGCACCTCGCATGGCGTT
GCAGTCAATGA

Upstream 100 bases:

>100_bases
CCCAGCTCACGCGCATGGCCCGCTTCCAAGTCCCAACTTGGCAGACACATTTCGAACATGTCGATCGGTTCCTGGAAACC
TTGGCCCCGTAAGCGCTTGC

Downstream 100 bases:

>100_bases
GTGTGAGAAAATGAGGTATCGCCGTAGAATTTACGATCCTCGATCAGTACAGACACATCGCGCGCTCAATATTGGCGACG
CTTTCTTTTAATAACTTACA

Product: capsule polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MSRSPTIHTHSWPNGIMPRKKGPALSWFTTSLESETADGWIGRIDAELATLSAIGSALNITRLVERFRAANVFDPSSCAT
RIPLGLLERGTAQRVLVLDEPASVYLQAPRRERERQFSRMLAAVHREQPEAEIWFARSGISSSGEWLSSSHPGIRGSNRY
IDTSESLCASLPYFDHVYTLSAVEGMQALLCGVPVHVFGMPYYAGWGLTHDDAPQPARQSHATLESLFEVVFIRLSRHLA
PAGKTSDSLEALLDAIEAHRATVLRFADIRHVAGIRFQWWKRPFATPFLTAGGGTLRWTDDASKLAEGEHAAFWGARSTE
GLPPDTPAVRIEDGFLHSIGLGSDHVAPCSQIIDRRGLYFDPSRPSDLTVILNETDFNETELARADALRNEITRLGLTKY
NLGRRKPAWHAPPGKRVVLVPGQVADDASIRLGTRGITTTEELLRTVRAHNPDAFIVYKPHPDVLSGNRRGLIEAAALAD
VMEQDSDLISLIEIADEVHTLSSLSGFEALIRRKAVFTYGLPFYAGWGLTHDALAPPWRDRKLSLDMLTAGVLLRYPIYW
DWTLHLFTSPEAIVRKLAIPAKRPLVKIRGNRLRPLLKAIRWSRNGLQHLAWRCSQ

Sequences:

>Translated_616_residues
MSRSPTIHTHSWPNGIMPRKKGPALSWFTTSLESETADGWIGRIDAELATLSAIGSALNITRLVERFRAANVFDPSSCAT
RIPLGLLERGTAQRVLVLDEPASVYLQAPRRERERQFSRMLAAVHREQPEAEIWFARSGISSSGEWLSSSHPGIRGSNRY
IDTSESLCASLPYFDHVYTLSAVEGMQALLCGVPVHVFGMPYYAGWGLTHDDAPQPARQSHATLESLFEVVFIRLSRHLA
PAGKTSDSLEALLDAIEAHRATVLRFADIRHVAGIRFQWWKRPFATPFLTAGGGTLRWTDDASKLAEGEHAAFWGARSTE
GLPPDTPAVRIEDGFLHSIGLGSDHVAPCSQIIDRRGLYFDPSRPSDLTVILNETDFNETELARADALRNEITRLGLTKY
NLGRRKPAWHAPPGKRVVLVPGQVADDASIRLGTRGITTTEELLRTVRAHNPDAFIVYKPHPDVLSGNRRGLIEAAALAD
VMEQDSDLISLIEIADEVHTLSSLSGFEALIRRKAVFTYGLPFYAGWGLTHDALAPPWRDRKLSLDMLTAGVLLRYPIYW
DWTLHLFTSPEAIVRKLAIPAKRPLVKIRGNRLRPLLKAIRWSRNGLQHLAWRCSQ
>Mature_615_residues
SRSPTIHTHSWPNGIMPRKKGPALSWFTTSLESETADGWIGRIDAELATLSAIGSALNITRLVERFRAANVFDPSSCATR
IPLGLLERGTAQRVLVLDEPASVYLQAPRRERERQFSRMLAAVHREQPEAEIWFARSGISSSGEWLSSSHPGIRGSNRYI
DTSESLCASLPYFDHVYTLSAVEGMQALLCGVPVHVFGMPYYAGWGLTHDDAPQPARQSHATLESLFEVVFIRLSRHLAP
AGKTSDSLEALLDAIEAHRATVLRFADIRHVAGIRFQWWKRPFATPFLTAGGGTLRWTDDASKLAEGEHAAFWGARSTEG
LPPDTPAVRIEDGFLHSIGLGSDHVAPCSQIIDRRGLYFDPSRPSDLTVILNETDFNETELARADALRNEITRLGLTKYN
LGRRKPAWHAPPGKRVVLVPGQVADDASIRLGTRGITTTEELLRTVRAHNPDAFIVYKPHPDVLSGNRRGLIEAAALADV
MEQDSDLISLIEIADEVHTLSSLSGFEALIRRKAVFTYGLPFYAGWGLTHDALAPPWRDRKLSLDMLTAGVLLRYPIYWD
WTLHLFTSPEAIVRKLAIPAKRPLVKIRGNRLRPLLKAIRWSRNGLQHLAWRCSQ

Specific function: Unknown

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti lipopolysaccharide processing protein lpsZ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 68555; Mature: 68424

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSPTIHTHSWPNGIMPRKKGPALSWFTTSLESETADGWIGRIDAELATLSAIGSALNI
CCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
TRLVERFRAANVFDPSSCATRIPLGLLERGTAQRVLVLDEPASVYLQAPRRERERQFSRM
HHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHH
LAAVHREQPEAEIWFARSGISSSGEWLSSSHPGIRGSNRYIDTSESLCASLPYFDHVYTL
HHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCEECCHHHHHHHCCCHHHHHHH
SAVEGMQALLCGVPVHVFGMPYYAGWGLTHDDAPQPARQSHATLESLFEVVFIRLSRHLA
HHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PAGKTSDSLEALLDAIEAHRATVLRFADIRHVAGIRFQWWKRPFATPFLTAGGGTLRWTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCEEEECC
DASKLAEGEHAAFWGARSTEGLPPDTPAVRIEDGFLHSIGLGSDHVAPCSQIIDRRGLYF
CHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCCCEE
DPSRPSDLTVILNETDFNETELARADALRNEITRLGLTKYNLGRRKPAWHAPPGKRVVLV
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCEEEEE
PGQVADDASIRLGTRGITTTEELLRTVRAHNPDAFIVYKPHPDVLSGNRRGLIEAAALAD
CCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
VMEQDSDLISLIEIADEVHTLSSLSGFEALIRRKAVFTYGLPFYAGWGLTHDALAPPWRD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCCCCCCCCCCC
RKLSLDMLTAGVLLRYPIYWDWTLHLFTSPEAIVRKLAIPAKRPLVKIRGNRLRPLLKAI
CEEEHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
RWSRNGLQHLAWRCSQ
HHHHCCHHHHHHHCCC
>Mature Secondary Structure 
SRSPTIHTHSWPNGIMPRKKGPALSWFTTSLESETADGWIGRIDAELATLSAIGSALNI
CCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
TRLVERFRAANVFDPSSCATRIPLGLLERGTAQRVLVLDEPASVYLQAPRRERERQFSRM
HHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCCEEEEEECCCCEEEECHHHHHHHHHHHH
LAAVHREQPEAEIWFARSGISSSGEWLSSSHPGIRGSNRYIDTSESLCASLPYFDHVYTL
HHHHHHCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCEECCHHHHHHHCCCHHHHHHH
SAVEGMQALLCGVPVHVFGMPYYAGWGLTHDDAPQPARQSHATLESLFEVVFIRLSRHLA
HHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PAGKTSDSLEALLDAIEAHRATVLRFADIRHVAGIRFQWWKRPFATPFLTAGGGTLRWTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCCEEEECC
DASKLAEGEHAAFWGARSTEGLPPDTPAVRIEDGFLHSIGLGSDHVAPCSQIIDRRGLYF
CHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCCCEE
DPSRPSDLTVILNETDFNETELARADALRNEITRLGLTKYNLGRRKPAWHAPPGKRVVLV
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCEEEEE
PGQVADDASIRLGTRGITTTEELLRTVRAHNPDAFIVYKPHPDVLSGNRRGLIEAAALAD
CCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
VMEQDSDLISLIEIADEVHTLSSLSGFEALIRRKAVFTYGLPFYAGWGLTHDALAPPWRD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCCCCCCCCCCC
RKLSLDMLTAGVLLRYPIYWDWTLHLFTSPEAIVRKLAIPAKRPLVKIRGNRLRPLLKAI
CEEEHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
RWSRNGLQHLAWRCSQ
HHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 7875563 [H]