| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065320
Identifier: 78065320
GI number: 78065320
Start: 753767
End: 754444
Strand: Reverse
Name: 78065320
Synonym: Bcep18194_A3846
Alternate gene names: NA
Gene position: 754444-753767 (Counterclockwise)
Preceding gene: 78065321
Following gene: 78065319
Centisome position: 20.42
GC content: 62.54
Gene sequence:
>678_bases ATGACTAATCTGGCACTCTTTGACCTCGATCACACGCTGATCACGACCGATAGCGACCACGAATGGGGCCGCTTCATGGT GAAGCTCGGCATCGTCGACGCGGAAAGCTTCTCGCGTCAGAACGATCAGTTCTTCGCCGACTACAAGGCCGGCAAGCTCG ACATCCACGCGTACCTCACGGCGATGCTCACGCCGCTCGCGAAGTATTCGCGCGCGCAGCTCGCCGAATGGCACGAGCAG TACATGCACGAGGTGATCCGGCCCGCAATGACACCCGCCGCGCTCGAGCTCGTGCGCAAGCACCTCGATGCTGGCGACCT GTGCTGCGTCGTGACGGCAACCAACGAATTCATCACGCGCCCGATCGCCTCCGCGTTCGGCGTCGACACGCTGATCGCCT GCGAAGTCGAAACGACCGACGGGCATCCCGATTCGCCGTACACGGGCCGGCCGACCGGCACGCCGAGCTATCGCGAAGGC AAGATCGTGCGCACCGAAGCATGGCTCGCGTCGCTCGGCAAGCAATGGAGCGACTTCACCCACACCTATTTCTACAGCGA CTCGCACAACGACATCCCGTTGCTCGAGAAAGTCACCGACCCGATCGCGACCAACCCTGACGACACGCTGCGTGCGCATG CAAGCAACCGCGGCTGGCGCATCCTCGATCTCTTCTGA
Upstream 100 bases:
>100_bases CCGTCACGCTGCCGTTGCTGCGCCGCATGCTGGCGCGTCCCGGCGACGACATCACACCACCGGGCACGGGCCCGAACCGC TTCGAGTAAAATGCGCTTCC
Downstream 100 bases:
>100_bases ACGTCGTGATCAAAAAATTCATCCGCAAGCTGCTCGGCCAGGACGAAACCGAGCAAACCTCTCCCGCAACGGCCCCGGCC GACGAAGCGGCCCCTGCTAC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTNLALFDLDHTLITTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGKLDIHAYLTAMLTPLAKYSRAQLAEWHEQ YMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITRPIASAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREG KIVRTEAWLASLGKQWSDFTHTYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF
Sequences:
>Translated_225_residues MTNLALFDLDHTLITTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGKLDIHAYLTAMLTPLAKYSRAQLAEWHEQ YMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITRPIASAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREG KIVRTEAWLASLGKQWSDFTHTYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF >Mature_224_residues TNLALFDLDHTLITTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGKLDIHAYLTAMLTPLAKYSRAQLAEWHEQY MHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITRPIASAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREGK IVRTEAWLASLGKQWSDFTHTYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25394; Mature: 25263
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLALFDLDHTLITTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGKLDIHAYLT CCCEEEEECCCEEEECCCCCCHHEEEEEEEEEEHHHHCCCCCCEEEECCCCCCHHHHHHH AMLTPLAKYSRAQLAEWHEQYMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHH PIASAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREGKIVRTEAWLASLGKQWSDFT HHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCE HTYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF EEEEECCCCCCCCHHHHHCCCCCCCCCHHHEECCCCCCEEEEEEC >Mature Secondary Structure TNLALFDLDHTLITTDSDHEWGRFMVKLGIVDAESFSRQNDQFFADYKAGKLDIHAYLT CCEEEEECCCEEEECCCCCCHHEEEEEEEEEEHHHHCCCCCCEEEECCCCCCHHHHHHH AMLTPLAKYSRAQLAEWHEQYMHEVIRPAMTPAALELVRKHLDAGDLCCVVTATNEFITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHH PIASAFGVDTLIACEVETTDGHPDSPYTGRPTGTPSYREGKIVRTEAWLASLGKQWSDFT HHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCE HTYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHASNRGWRILDLF EEEEECCCCCCCCHHHHHCCCCCCCCCHHHEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA