| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065272
Identifier: 78065272
GI number: 78065272
Start: 690715
End: 692838
Strand: Reverse
Name: 78065272
Synonym: Bcep18194_A3796
Alternate gene names: NA
Gene position: 692838-690715 (Counterclockwise)
Preceding gene: 78065273
Following gene: 78065271
Centisome position: 18.76
GC content: 69.16
Gene sequence:
>2124_bases ATGTTTCGTTCCCTGACGACCCTGATCAAGAAGTGGCGCGCGTCGCGCAATGCCGGTCACCAGCTCGATGCGCTGCTCGC GCACGCCGACGCCGATGCGTCGTACGCCGAGCGCAGCGAATGGCTGATCGAGCTCGCGCACTGGCTGCGCCGCACCGGCA CGATGCAGGCCGCGCAGGACACGCCGGCCGATCGCGACGCCGATGCGCGCGCGTATCCGGCCCATGCGCGGTTGCGCTAC CTGTTCCACGTGCTCGATCGCAATCCCGCGTGGAAAACCCACGCCGCGCGCATCCTGCGCGGCATCCTGCGCGAGTGCGA CGGCATCTCGCTCCTGTGCGACGCCGGCATGCCCGTGCACTCGGGCTTCTTCGGCGCGCTGTTCGAGCGGATCGACTCGT CGCTGATCCCGCCCGCGCCGAACCGCCGCGAGCTGTCGGCGCTGTTCACGCTGATGTTCCCGACGCCGGAAGACGCGCAA TGGATCGACACGCTGCCCGACGATCTCCTCGCGCGCCTCGCCGAGCTGATCTCGTTCGACGTCACCGACGAAGAGCGCCA TGAACCGGGCTCGTTCTCGCGCGACCTGCTGGCCGCACTGCACAACCTGACCTGCCAGATCAGCTCGACCGGGCTGTCGC AGACGGTGCGCAGCCGGCTTTCCGACGACGACGCACGCAAGCCGCTCGAAACGCAGCCGTTCTACCGCCTCATGCGCGCG ATGCTCGCGGTCGAGACTGCGCACGCGGCCGTCGAGGACGGCGGCGACCCGAGCAAGCTGCTGCACGAGGTGAACTACCT GCGCGTGCTGCTCGACGAATGCCGGATCGCCGTCGACGACGTGTTCTCGCACCTGTACCGCAACGGCGTGTCGGTCGACA TCGTGTTCCAGGTCGAGCGGATGCGCATGCGCATCCTGCGCGCCGAGATGCTGCTGAACGCGTGGATGGCGCGCGACGAC CTGCACGGCATGGCGCACCTGACGGCCGAGCTCGTCGACGCGAACCACAACAGCCAGAGCGTGTCGCACCTCGTGCGCAG CAACTTCTCGCTGTTCGCGCGCAAGCTCGTCGAAACCAACGCGGACACCGGCGAGCACTACATCTCGCGCGGCCGCGCCG AGTACCTGAAGATGTTGCGGATGGCCGCGGGCGGCGGCCTCGTCACGGTCGTGACCGTGTGCGTGAAATTCGCGATCACG GGCGCGCACCTGCAATCGATGTTCGAAGGGCTGCTCGCGGGCGTCAACTACGCGGCCAGCTTCATGCTGATGCACTTCCT GCACTTCACGCTCGCGACCAAGCAGCCCGCGATGACCGCACCGACGCTCGCGCGCGAGCTCGACGACACCGGCCACGAGG AAGGCGTGAAGGCGTTCGTGTCGTCGGTGATCGCGCTGATCCGCACGCAGGCCGCCGCGATTTCCGGCAACGTGCTCGTC GTGCTGCCCGTGTGCCTGCTGGTGCAGCTGTTCGCGGGCAACGTGCTGCACGCGAACCTGATCTCGCCGGAAAAGGCGCA CGTGACACTGCACTCGTTCTCGCTGCTCGGCCCGACGCCGCTCTACGCGGCGCTGACCGGCGTGCTGCTGTGGGCGTCGA GCCTGATCGCGGGCTGGGCCGACAACTGGTTCGTGCTGCACCGGGTCGGCGACGCGCTCACGTACAACCGCCGGCTGCGC CTCACGCTCGGCGCGGCCGGCGCCGCGAAGCTCGCGCACTTCTGCCGGTCGAATGTGGCCGGCGTGGTCGCGAACGTCGG CCTCGGCCTGATGCTCGGCCTCATTCCGGCGATCGTCACCGTGTTCATGTTCCCGTTCGAGGTGCGGCACGTGACGCTGT CGGCCGGGTCGATCGGCATCGCGCTCGGCGTGCTGGGCAAGGACGCGCTCGGCACGCCCGAGCTGTGGTGGGCCGGCGCC GGCGTGCTCAGCATGGCGATCCTCAACGTGCTCGTGAGCTTCGCGCTCGCGTTTACGATGGCCGTGCGCTCGCGCAGCCT GCGCCGGACCAAGGTGCGCGCGCTCATCGTCGCGATCGTCCGCACGGTGCTGTCGAACCCGCTCGCGCTGTTCTGGCCGG GCAGCGGCCCGGCCGCGCGCGCCGGCCAGACGGGCTCGCACTGA
Upstream 100 bases:
>100_bases TCCGGCAACCGGCCCCGTCTCACCCGTTCTCCCCGGCGCCGCGCCGTTTCCCCGGCCGGCATCCCGAACCCGCCCGCCGA GGGCTTTCGCTATTCCGTTT
Downstream 100 bases:
>100_bases CCCTGCGGCAGTATGGCGGTGCCCGCCCGGGCGCCGCCGCGCGGCCTCCGGGCACGCCTGCGCGGCGCCCGGGCCCGCGC CGCAGCATCGAAACGCGACG
Product: site-specific recombinase-like
Products: NA
Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MFRSLTTLIKKWRASRNAGHQLDALLAHADADASYAERSEWLIELAHWLRRTGTMQAAQDTPADRDADARAYPAHARLRY LFHVLDRNPAWKTHAARILRGILRECDGISLLCDAGMPVHSGFFGALFERIDSSLIPPAPNRRELSALFTLMFPTPEDAQ WIDTLPDDLLARLAELISFDVTDEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLETQPFYRLMRA MLAVETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFSHLYRNGVSVDIVFQVERMRMRILRAEMLLNAWMARDD LHGMAHLTAELVDANHNSQSVSHLVRSNFSLFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVVTVCVKFAIT GAHLQSMFEGLLAGVNYAASFMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKAFVSSVIALIRTQAAAISGNVLV VLPVCLLVQLFAGNVLHANLISPEKAHVTLHSFSLLGPTPLYAALTGVLLWASSLIAGWADNWFVLHRVGDALTYNRRLR LTLGAAGAAKLAHFCRSNVAGVVANVGLGLMLGLIPAIVTVFMFPFEVRHVTLSAGSIGIALGVLGKDALGTPELWWAGA GVLSMAILNVLVSFALAFTMAVRSRSLRRTKVRALIVAIVRTVLSNPLALFWPGSGPAARAGQTGSH
Sequences:
>Translated_707_residues MFRSLTTLIKKWRASRNAGHQLDALLAHADADASYAERSEWLIELAHWLRRTGTMQAAQDTPADRDADARAYPAHARLRY LFHVLDRNPAWKTHAARILRGILRECDGISLLCDAGMPVHSGFFGALFERIDSSLIPPAPNRRELSALFTLMFPTPEDAQ WIDTLPDDLLARLAELISFDVTDEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLETQPFYRLMRA MLAVETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFSHLYRNGVSVDIVFQVERMRMRILRAEMLLNAWMARDD LHGMAHLTAELVDANHNSQSVSHLVRSNFSLFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVVTVCVKFAIT GAHLQSMFEGLLAGVNYAASFMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKAFVSSVIALIRTQAAAISGNVLV VLPVCLLVQLFAGNVLHANLISPEKAHVTLHSFSLLGPTPLYAALTGVLLWASSLIAGWADNWFVLHRVGDALTYNRRLR LTLGAAGAAKLAHFCRSNVAGVVANVGLGLMLGLIPAIVTVFMFPFEVRHVTLSAGSIGIALGVLGKDALGTPELWWAGA GVLSMAILNVLVSFALAFTMAVRSRSLRRTKVRALIVAIVRTVLSNPLALFWPGSGPAARAGQTGSH >Mature_707_residues MFRSLTTLIKKWRASRNAGHQLDALLAHADADASYAERSEWLIELAHWLRRTGTMQAAQDTPADRDADARAYPAHARLRY LFHVLDRNPAWKTHAARILRGILRECDGISLLCDAGMPVHSGFFGALFERIDSSLIPPAPNRRELSALFTLMFPTPEDAQ WIDTLPDDLLARLAELISFDVTDEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLETQPFYRLMRA MLAVETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFSHLYRNGVSVDIVFQVERMRMRILRAEMLLNAWMARDD LHGMAHLTAELVDANHNSQSVSHLVRSNFSLFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVVTVCVKFAIT GAHLQSMFEGLLAGVNYAASFMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKAFVSSVIALIRTQAAAISGNVLV VLPVCLLVQLFAGNVLHANLISPEKAHVTLHSFSLLGPTPLYAALTGVLLWASSLIAGWADNWFVLHRVGDALTYNRRLR LTLGAAGAAKLAHFCRSNVAGVVANVGLGLMLGLIPAIVTVFMFPFEVRHVTLSAGSIGIALGVLGKDALGTPELWWAGA GVLSMAILNVLVSFALAFTMAVRSRSLRRTKVRALIVAIVRTVLSNPLALFWPGSGPAARAGQTGSH
Specific function: Unknown
COG id: COG4389
COG function: function code L; Site-specific recombinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77364; Mature: 77364
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSLTTLIKKWRASRNAGHQLDALLAHADADASYAERSEWLIELAHWLRRTGTMQAAQD CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC TPADRDADARAYPAHARLRYLFHVLDRNPAWKTHAARILRGILRECDGISLLCDAGMPVH CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC SGFFGALFERIDSSLIPPAPNRRELSALFTLMFPTPEDAQWIDTLPDDLLARLAELISFD CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCC VTDEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLETQPFYRLMRA CCCCCCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHH MLAVETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFSHLYRNGVSVDIVFQVER HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH MRMRILRAEMLLNAWMARDDLHGMAHLTAELVDANHNSQSVSHLVRSNFSLFARKLVETN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC ADTGEHYISRGRAEYLKMLRMAAGGGLVTVVTVCVKFAITGAHLQSMFEGLLAGVNYAAS CCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKAFVSSVIALIRTQAAAISGNVLV HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLPVCLLVQLFAGNVLHANLISPEKAHVTLHSFSLLGPTPLYAALTGVLLWASSLIAGWA HHHHHHHHHHHHCCCEEECCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC DNWFVLHRVGDALTYNRRLRLTLGAAGAAKLAHFCRSNVAGVVANVGLGLMLGLIPAIVT CCEEEEEHHCCHHEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFMFPFEVRHVTLSAGSIGIALGVLGKDALGTPELWWAGAGVLSMAILNVLVSFALAFTM HHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVRSRSLRRTKVRALIVAIVRTVLSNPLALFWPGSGPAARAGQTGSH HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MFRSLTTLIKKWRASRNAGHQLDALLAHADADASYAERSEWLIELAHWLRRTGTMQAAQD CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC TPADRDADARAYPAHARLRYLFHVLDRNPAWKTHAARILRGILRECDGISLLCDAGMPVH CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC SGFFGALFERIDSSLIPPAPNRRELSALFTLMFPTPEDAQWIDTLPDDLLARLAELISFD CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCC VTDEERHEPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDDDARKPLETQPFYRLMRA CCCCCCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHH MLAVETAHAAVEDGGDPSKLLHEVNYLRVLLDECRIAVDDVFSHLYRNGVSVDIVFQVER HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH MRMRILRAEMLLNAWMARDDLHGMAHLTAELVDANHNSQSVSHLVRSNFSLFARKLVETN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC ADTGEHYISRGRAEYLKMLRMAAGGGLVTVVTVCVKFAITGAHLQSMFEGLLAGVNYAAS CCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMLMHFLHFTLATKQPAMTAPTLARELDDTGHEEGVKAFVSSVIALIRTQAAAISGNVLV HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLPVCLLVQLFAGNVLHANLISPEKAHVTLHSFSLLGPTPLYAALTGVLLWASSLIAGWA HHHHHHHHHHHHCCCEEECCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC DNWFVLHRVGDALTYNRRLRLTLGAAGAAKLAHFCRSNVAGVVANVGLGLMLGLIPAIVT CCEEEEEHHCCHHEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFMFPFEVRHVTLSAGSIGIALGVLGKDALGTPELWWAGAGVLSMAILNVLVSFALAFTM HHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVRSRSLRRTKVRALIVAIVRTVLSNPLALFWPGSGPAARAGQTGSH HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA