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The map label for this gene is ydhM [C]

Identifier: 78065063

GI number: 78065063

Start: 459921

End: 460541

Strand: Reverse

Name: ydhM [C]

Synonym: Bcep18194_A3587

Alternate gene names: 78065063

Gene position: 460541-459921 (Counterclockwise)

Preceding gene: 78065067

Following gene: 78065062

Centisome position: 12.47

GC content: 67.15

Gene sequence:

>621_bases
ATGTCGGGCATCGAGATCGCCAAACCGCCGGCGCGCCGCACGCGCCGGCCGATCGACGGCGCCACCGCGCAGGAGCACCT
GCTACGCGCCGCCGAAGAGCTGTTTTACAAGGAAGGGGTGCGGACGGTGGGCGTCGAGGCGGTCGTGGAGCGTGCGGGCG
TCAACAAGATGAGCCTGTACCGCCAGTTCTCGTCGAAGGACGAGCTGATCCTCGCGTACCTGGAGCGGATGGATGCGTGC
TTCTTCGACCGCTTCAACACGAGCGTCGCGAAGCACCCGGGTCAGCCGAAAGCGCAGCTGATCCAGTATTTCGTCGATCT
CGCCGAGCGCGCGACGCAGAAGGATTACCGCGGCTGCCCGTTCGTCAACGTCGCAGCCGAATTCCCGGATGCGTCGCACC
CGGCGCGCGAGCGCGTCGCGCAGAACAAGGAACAGCTGATGAAGCGGCTCGTCGCACTGTGCGAAGACGCCGGTGCGCGG
CAGCCGCAGGTGCTCGCCGACTCGCTCGCGCTGGTGATCGAAGGCATCTACGCGGCCAGCCAGACCTATCGGCACGGTGA
AACGCCGATCGGCGTCGCGCCCGCGCTCGTCACGCAGTTGATCGAAGCCGCCTGCGCGTGA

Upstream 100 bases:

>100_bases
GATCCGTTCGGCATTGTTACCGACCGGTCACAAGTGTGTTGCGATCGTAGTGACCAATCGGTAACATGTCAAGCAATCCA
ATATGCAGTCGAGGGTCATC

Downstream 100 bases:

>100_bases
CGGCGCGCCCGCTACAATGCGGCCCTCGCCGCCCTTCCGCCCGACTGGTTTCACGATGACCGACACCCGCCCCGAATCGC
ACGACGACATCCTCGCCGCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulatory Protein; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulator Tetr Family; Transcriptional Regulator Tetr-Like Protein

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSGIEIAKPPARRTRRPIDGATAQEHLLRAAEELFYKEGVRTVGVEAVVERAGVNKMSLYRQFSSKDELILAYLERMDAC
FFDRFNTSVAKHPGQPKAQLIQYFVDLAERATQKDYRGCPFVNVAAEFPDASHPARERVAQNKEQLMKRLVALCEDAGAR
QPQVLADSLALVIEGIYAASQTYRHGETPIGVAPALVTQLIEAACA

Sequences:

>Translated_206_residues
MSGIEIAKPPARRTRRPIDGATAQEHLLRAAEELFYKEGVRTVGVEAVVERAGVNKMSLYRQFSSKDELILAYLERMDAC
FFDRFNTSVAKHPGQPKAQLIQYFVDLAERATQKDYRGCPFVNVAAEFPDASHPARERVAQNKEQLMKRLVALCEDAGAR
QPQVLADSLALVIEGIYAASQTYRHGETPIGVAPALVTQLIEAACA
>Mature_205_residues
SGIEIAKPPARRTRRPIDGATAQEHLLRAAEELFYKEGVRTVGVEAVVERAGVNKMSLYRQFSSKDELILAYLERMDACF
FDRFNTSVAKHPGQPKAQLIQYFVDLAERATQKDYRGCPFVNVAAEFPDASHPARERVAQNKEQLMKRLVALCEDAGARQ
PQVLADSLALVIEGIYAASQTYRHGETPIGVAPALVTQLIEAACA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22790; Mature: 22659

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIEIAKPPARRTRRPIDGATAQEHLLRAAEELFYKEGVRTVGVEAVVERAGVNKMSLY
CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
RQFSSKDELILAYLERMDACFFDRFNTSVAKHPGQPKAQLIQYFVDLAERATQKDYRGCP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
FVNVAAEFPDASHPARERVAQNKEQLMKRLVALCEDAGARQPQVLADSLALVIEGIYAAS
CEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QTYRHGETPIGVAPALVTQLIEAACA
HHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGIEIAKPPARRTRRPIDGATAQEHLLRAAEELFYKEGVRTVGVEAVVERAGVNKMSLY
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
RQFSSKDELILAYLERMDACFFDRFNTSVAKHPGQPKAQLIQYFVDLAERATQKDYRGCP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
FVNVAAEFPDASHPARERVAQNKEQLMKRLVALCEDAGARQPQVLADSLALVIEGIYAAS
CEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QTYRHGETPIGVAPALVTQLIEAACA
HHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA