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The map label for this gene is clpV1 [H]

Identifier: 78065041

GI number: 78065041

Start: 430996

End: 433665

Strand: Direct

Name: clpV1 [H]

Synonym: Bcep18194_A3565

Alternate gene names: 78065041

Gene position: 430996-433665 (Clockwise)

Preceding gene: 78065040

Following gene: 78065042

Centisome position: 11.67

GC content: 68.5

Gene sequence:

>2670_bases
ATGAGCACGCCTCTGAAGACCCTGATCACGAAACTGAACCCGCTGTGTCGCCACGCCACCGAGCGTGCGGCGAGCGCGTG
CCTGGCGCGCGGCCATTACGAGGTCGATCTGGAGCACCTGTTCCTCGCGTTGCTCGAGGAAGCGACGGGCGACCTGCCGC
TCGCATTGCGCGCGAGCCGCGTCGATCCGCACGCGCTGCACGCCGATCTCGAGCGCGAACTGACGCGCCTGAAGACGGGC
AACACGCGCACGCCGGTGTTCTCCGTGCACCTGATCGCGCTGTTCGAACAGGCATGGCTGATCGCGTCGCTCGACTCGCA
GCTCGGCCGCATCCGTTCGGGGCACCTGCTGCTCGCGCTGCTGACCGCGTCCGATCTCGCGCAATTCGCGCAACGGATGT
CGTCGCAGTTCGCGGAAATGAACGTGACGGACCTGAAGCACAAGTTCGACGAGATCATGGCCGGCTCGAGCGAAGCCGGG
CCGCGTCAGGCGGACGACGAGGGTAGCGACGTCGCGCCGGCCGCCGACGGCATGGCACCCGCGGCCGGCCCGTCGAAGAC
GCCCGCGCTCGACACGTACACGACCAACCTCACGCAGCGCGCACGCGACGGCAAGATCGACCCGGTGATCGGCCGTGAGG
CCGAGATTCGCCAGGCGATCGACATCCTGATGCGCCGCCGCCAGAACAACCCGATCATGACCGGCGAGGCCGGTGTCGGC
AAAACGGCGGTCGTCGAGGGCCTCGCGCTGCGCATCGCGGCCGACGACGTGCCGCCGCCGTTGCGCGGCGTCGCGCTGCA
CGTGCTCGACATGGGGCTGCTGCAGGCCGGCGCGAGCGTGAAGGGCGAGTTCGAGAACCGCCTGAAGAGCGTGATCGACG
AGGTGAAGAAGAGCGCGCATCCGATCATCCTGTTCATCGACGAGGCGCACACGATCATCGGCGCGGGCGGCCAGGCCGGC
CAGAACGACGCGGCGAACCTGCTGAAGCCGGCGCTTGCGCGCGGCGAGCTGCGCACGATTGCGGCGACGACGTGGAGCGA
ATACAAGAAGTACTTCGAGAAGGATGCGGCGCTGGCGCGGCGCTTCCAGGTCGTGAAGGTCGAGGAGCCGAGCGAGCCGC
TCGCGGCCGCGATGCTGCGCGGGATGTCCGGCCTGATGGAGAAGCACTTCAACGTGCGGATTCTCGACGACGCGATCACC
GAGGCCGTGCGCCTGTCGCACCGCTACATCAGCGGCCGCCAACTGCCGGACAAGGCAATCAGCGTGCTCGACACCGCGTG
CGCGAAGGTCGCGCTCGCGCACAGCGCGACGCCGGCGGCGATCGACGACACGAAGAAGCGCATCGAGCGGATCGACGCGG
AAATCGCGTCGCTGGAGCGCGAGGCGGCCGGCGGCGCGTCGCACGACGAGCGGCTCGGCGAGCTGCGCGCTGCGCGCGAC
ACGGCGCTCGAACAACTGGCGAAGGACGAAGCGCGCTATGAAGCCGAGCGCGTGATCGTCGCCGAGATCACCGAACTGCG
CGAAGCGCTCGACAAGGCACGCGGCCCGTCGGAAGACGGCCAGCCGGTCGACGTGCAGGCCACCCGCGACAAGCTCGCGG
AACGCGTCGCGGCGCTGCACGCGCTGCAGGGCGGCGAGCCGATGGTGCCGCTGCAGGTCGATGGTCACGTGGTTGCCGAG
ATCGTCGCCGCATGGACGGGCATTCCGCTCGGCCGGATGGTGAAGGACGAGATCGACACCGTGCTGAACCTGCAACCGCT
GCTCGCCGCGCGCGTGATCGGCCAGGACCACGCGCTGGAAGCGATCGCGCAGCGCGTGCGCACCGCGACCGCGAGCCTCG
AGGATCCGAACAAGCCGCGCGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTCGGCAAGACCGAGACGGCGCTTGCGCTG
GCCGACATCCTGTACGGCGGCGAGCGCAAGATGGTCACGATCAACATGAGCGAGTATCAGGAAGCGCACAGCGTGTCGGG
CCTGAAGGGCTCGCCGCCGGGCTACGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAGGCCGTGCGCCGCAACCCGTATT
CCGTCGTGCTGCTCGACGAGGTCGAGAAGGCGCACCCGGACGTGCTCGAGATGTTCTTCCAGGTGTTCGACAAGGGCGCG
ATGGACGATGCGGAAGGGCGCGAGATCGACTTCCGCAACACGCTGATCATCCTGACGTCGAACGTCGGTTCCACCGCGGT
GATGCAGGCGTGCCTGAACAAGCCGGTCGAGGAGCTGCCCGATCCGGACGCGCTCGCCGAGACGCTGCGCCCGCAGCTGT
ACAAGACCTTCAAGCCCGCATTCCTCGGGCGGATGAAGGTCGTGCCGTACTACCCGATTTCCGACGACGTGCTGGCCGAG
ATCATCGAGCTGAAGCTCGAGCGGATCCGCCGCCGGATCGAGACGAACCACAAGGCGGCGTTCGAATGGGACGAATCGCT
TGTCGATGCGGTGCTCGCGCGCTGCACCGAGGTCGATTCGGGCGCCCGCAACGTCGACCACATCCTGAACGGCACGCTGC
TGCCGGAGATCGCGGGCCACGTGCTCGGCCGGATCGCCGACGGCGAGGCCATCGCGCGCATCGCGGTGCGCGCGGACGAG
GCCGGCGAATTCACGTACACCGTCGAATGA

Upstream 100 bases:

>100_bases
CGCGACGCGATCGAGGATCGCTCCGACGCCCGCTACGAGCTGCACGTGATTCACTGATTCCGAACGACAACAAACACGCA
ACGAACCTGAGATCGACGCC

Downstream 100 bases:

>100_bases
GCGCGGCCGTGCAACACAAGCATTTGATGAACTGACCGAACCATGCCGATCAATCTCCCCGAGTTGCTGACGCCGATCAG
CGATGCGTCGCCCAGCGGCG

Product: chaperonin clpA/B/, ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 889; Mature: 888

Protein sequence:

>889_residues
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLEEATGDLPLALRASRVDPHALHADLERELTRLKTG
NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTASDLAQFAQRMSSQFAEMNVTDLKHKFDEIMAGSSEAG
PRQADDEGSDVAPAADGMAPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAG
QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAIT
EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGASHDERLGELRAARD
TALEQLAKDEARYEAERVIVAEITELREALDKARGPSEDGQPVDVQATRDKLAERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIDTVLNLQPLLAARVIGQDHALEAIAQRVRTATASLEDPNKPRGVFMFVGPSGVGKTETALAL
ADILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGA
MDDAEGREIDFRNTLIILTSNVGSTAVMQACLNKPVEELPDPDALAETLRPQLYKTFKPAFLGRMKVVPYYPISDDVLAE
IIELKLERIRRRIETNHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGEAIARIAVRADE
AGEFTYTVE

Sequences:

>Translated_889_residues
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLEEATGDLPLALRASRVDPHALHADLERELTRLKTG
NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTASDLAQFAQRMSSQFAEMNVTDLKHKFDEIMAGSSEAG
PRQADDEGSDVAPAADGMAPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAG
QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAIT
EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGASHDERLGELRAARD
TALEQLAKDEARYEAERVIVAEITELREALDKARGPSEDGQPVDVQATRDKLAERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIDTVLNLQPLLAARVIGQDHALEAIAQRVRTATASLEDPNKPRGVFMFVGPSGVGKTETALAL
ADILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGA
MDDAEGREIDFRNTLIILTSNVGSTAVMQACLNKPVEELPDPDALAETLRPQLYKTFKPAFLGRMKVVPYYPISDDVLAE
IIELKLERIRRRIETNHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGEAIARIAVRADE
AGEFTYTVE
>Mature_888_residues
STPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLEEATGDLPLALRASRVDPHALHADLERELTRLKTGN
TRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTASDLAQFAQRMSSQFAEMNVTDLKHKFDEIMAGSSEAGP
RQADDEGSDVAPAADGMAPAAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVGK
TAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQ
NDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAITE
AVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGASHDERLGELRAARDT
ALEQLAKDEARYEAERVIVAEITELREALDKARGPSEDGQPVDVQATRDKLAERVAALHALQGGEPMVPLQVDGHVVAEI
VAAWTGIPLGRMVKDEIDTVLNLQPLLAARVIGQDHALEAIAQRVRTATASLEDPNKPRGVFMFVGPSGVGKTETALALA
DILYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGAM
DDAEGREIDFRNTLIILTSNVGSTAVMQACLNKPVEELPDPDALAETLRPQLYKTFKPAFLGRMKVVPYYPISDDVLAEI
IELKLERIRRRIETNHKAAFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGEAIARIAVRADEA
GEFTYTVE

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=317, Percent_Identity=33.1230283911672, Blast_Score=170, Evalue=7e-42,
Organism=Escherichia coli, GI1788943, Length=824, Percent_Identity=38.7135922330097, Blast_Score=522, Evalue=1e-149,
Organism=Escherichia coli, GI1787109, Length=472, Percent_Identity=35.3813559322034, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6320464, Length=724, Percent_Identity=38.9502762430939, Blast_Score=464, Evalue=1e-131,
Organism=Saccharomyces cerevisiae, GI6323002, Length=781, Percent_Identity=34.955185659411, Blast_Score=458, Evalue=1e-129,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 96552; Mature: 96421

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLEEATGDLPLALRASR
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCCCEEEEECC
VDPHALHADLERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLAL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
LTASDLAQFAQRMSSQFAEMNVTDLKHKFDEIMAGSSEAGPRQADDEGSDVAPAADGMAP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCC
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAH
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
HEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
SVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGASHDERLGELRAARD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TALEQLAKDEARYEAERVIVAEITELREALDKARGPSEDGQPVDVQATRDKLAERVAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH
ALQGGEPMVPLQVDGHVVAEIVAAWTGIPLGRMVKDEIDTVLNLQPLLAARVIGQDHALE
HHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHH
AIAQRVRTATASLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMVTINMSEYQ
HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHH
EAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGA
HHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC
MDDAEGREIDFRNTLIILTSNVGSTAVMQACLNKPVEELPDPDALAETLRPQLYKTFKPA
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
FLGRMKVVPYYPISDDVLAEIIELKLERIRRRIETNHKAAFEWDESLVDAVLARCTEVDS
HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GARNVDHILNGTLLPEIAGHVLGRIADGEAIARIAVRADEAGEFTYTVE
CCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEEC
>Mature Secondary Structure 
STPLKTLITKLNPLCRHATERAASACLARGHYEVDLEHLFLALLEEATGDLPLALRASR
CCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCCCEEEEECC
VDPHALHADLERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLAL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
LTASDLAQFAQRMSSQFAEMNVTDLKHKFDEIMAGSSEAGPRQADDEGSDVAPAADGMAP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGPSKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCC
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSAH
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQVVKVEEPSEPLAAAMLRGMSGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
HEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
SVLDTACAKVALAHSATPAAIDDTKKRIERIDAEIASLEREAAGGASHDERLGELRAARD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TALEQLAKDEARYEAERVIVAEITELREALDKARGPSEDGQPVDVQATRDKLAERVAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHH
ALQGGEPMVPLQVDGHVVAEIVAAWTGIPLGRMVKDEIDTVLNLQPLLAARVIGQDHALE
HHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHH
AIAQRVRTATASLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMVTINMSEYQ
HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHH
EAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGA
HHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC
MDDAEGREIDFRNTLIILTSNVGSTAVMQACLNKPVEELPDPDALAETLRPQLYKTFKPA
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
FLGRMKVVPYYPISDDVLAEIIELKLERIRRRIETNHKAAFEWDESLVDAVLARCTEVDS
HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GARNVDHILNGTLLPEIAGHVLGRIADGEAIARIAVRADEAGEFTYTVE
CCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]