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The map label for this gene is 78065023

Identifier: 78065023

GI number: 78065023

Start: 408597

End: 409253

Strand: Reverse

Name: 78065023

Synonym: Bcep18194_A3546

Alternate gene names: NA

Gene position: 409253-408597 (Counterclockwise)

Preceding gene: 78065025

Following gene: 78065021

Centisome position: 11.08

GC content: 66.67

Gene sequence:

>657_bases
TTGCCCGCTCGCGGACCGTTTCCCTGCCCTTCATCGCGGATCGACCGAATACGGGAAACTCCCATGCTTCGATCCGTTCG
CATGGCGCATGCGGCGCACGACCACGTTCGGCGCGCGCCCGAGCGTCATCCCGACGAGCACGCCCCATACCGCGAACGAC
AGCATCACGAAGCCGCTCGTCGCCGCCCAAGGCGCGTGCAAGGCGACCGCGTAATGGATGCTGGTTTCGGCGACGAACGT
CGGCATCAGCGTGACGAGCAGGCTCGCGTCGCCGGGCAGGCGCACGCGTGGGCCGATGCGCTCGCACAAGCGGCGCAAGC
TCGCGACGCGGCGCCGAACCGCTGGCTGACGGCAGGCGTGAAGGATGCGACGCGTCTCATATCGGTCGACGACGTGCTGT
ACTTCCAGGCTTCGGAGAAATACACGGAAGTCGTCGCGGCCGGACAACGGCTCGTGATTCGCACGCCGCTCAAGGAACTG
ATGCAGCGGCTCGATCCGGAGCGGCTCGCGCAGGTGCATCGCGGCGTGATCGTTGCGTACGCAGCGATCGATCGTGTCGA
GCGCGATCTGTTGGGACGGTTGCGGATTCGCGTGCGCGGGCAGCGGGAGATGCTGCCCGTGAGCCGCGCGTATGCGGGGT
TATTCAGGCAGATGTGA

Upstream 100 bases:

>100_bases
ACAGGAAAACGGGGCGCAAATCGGGGGGTGTCATACGCCGTTTCGGTTCGATGCCCCAACGATTGACGAAGACGGGCCGT
ATCGCCTGTCAGGCCGTCAG

Downstream 100 bases:

>100_bases
CGGTATCGGCCGTCATGTGCGGAACCCCTGAGGGATGACGCTGCTGCCATGCCATCCGACGGCGCGCGGATCAATTGCAG
GCGTCGAGCCCGAGCACGCC

Product: LytR/AlgR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MPARGPFPCPSSRIDRIRETPMLRSVRMAHAAHDHVRRAPERHPDEHAPYRERQHHEAARRRPRRVQGDRVMDAGFGDER
RHQRDEQARVAGQAHAWADALAQAAQARDAAPNRWLTAGVKDATRLISVDDVLYFQASEKYTEVVAAGQRLVIRTPLKEL
MQRLDPERLAQVHRGVIVAYAAIDRVERDLLGRLRIRVRGQREMLPVSRAYAGLFRQM

Sequences:

>Translated_218_residues
MPARGPFPCPSSRIDRIRETPMLRSVRMAHAAHDHVRRAPERHPDEHAPYRERQHHEAARRRPRRVQGDRVMDAGFGDER
RHQRDEQARVAGQAHAWADALAQAAQARDAAPNRWLTAGVKDATRLISVDDVLYFQASEKYTEVVAAGQRLVIRTPLKEL
MQRLDPERLAQVHRGVIVAYAAIDRVERDLLGRLRIRVRGQREMLPVSRAYAGLFRQM
>Mature_217_residues
PARGPFPCPSSRIDRIRETPMLRSVRMAHAAHDHVRRAPERHPDEHAPYRERQHHEAARRRPRRVQGDRVMDAGFGDERR
HQRDEQARVAGQAHAWADALAQAAQARDAAPNRWLTAGVKDATRLISVDDVLYFQASEKYTEVVAAGQRLVIRTPLKELM
QRLDPERLAQVHRGVIVAYAAIDRVERDLLGRLRIRVRGQREMLPVSRAYAGLFRQM

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25060; Mature: 24929

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARGPFPCPSSRIDRIRETPMLRSVRMAHAAHDHVRRAPERHPDEHAPYRERQHHEAAR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RRPRRVQGDRVMDAGFGDERRHQRDEQARVAGQAHAWADALAQAAQARDAAPNRWLTAGV
HCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCH
KDATRLISVDDVLYFQASEKYTEVVAAGQRLVIRTPLKELMQRLDPERLAQVHRGVIVAY
HHHHHHHHHHHHHEECCCHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHH
AAIDRVERDLLGRLRIRVRGQREMLPVSRAYAGLFRQM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PARGPFPCPSSRIDRIRETPMLRSVRMAHAAHDHVRRAPERHPDEHAPYRERQHHEAAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RRPRRVQGDRVMDAGFGDERRHQRDEQARVAGQAHAWADALAQAAQARDAAPNRWLTAGV
HCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCH
KDATRLISVDDVLYFQASEKYTEVVAAGQRLVIRTPLKELMQRLDPERLAQVHRGVIVAY
HHHHHHHHHHHHHEECCCHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHH
AAIDRVERDLLGRLRIRVRGQREMLPVSRAYAGLFRQM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA