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The map label for this gene is ychE [H]

Identifier: 78065003

GI number: 78065003

Start: 392809

End: 393429

Strand: Direct

Name: ychE [H]

Synonym: Bcep18194_A3526

Alternate gene names: 78065003

Gene position: 392809-393429 (Clockwise)

Preceding gene: 78065002

Following gene: 78065004

Centisome position: 10.63

GC content: 63.45

Gene sequence:

>621_bases
ATGGATCTGCTCAAATCGTTCATTTCGCTGCTGGCGCTGATCAACCCGGTCGGTGCGGTGCCGTTCTTCCTGAGCCTGAC
GGCGCAGCAGACGGATGCCGAGCGGCGGCGCACGATCCGGATCGCGTCGGTGTCGGTGTTCTGCGTGATCACGGTGACGA
CGCTGCTCGGGCAGCAGATCATCAACTTCTTCGGCATTTCGGTCGGGTCGCTCGAAGTGGGCGGCGGGATCATCATGCTG
CTGATGGCGATCAACATGCTGAACGCACAGATCGGCAACACGCGATCGACGCCGGAGGAGCGCCACGAGGCCGAGCTGAA
GGACAACATCGCGGTCGTGCCGCTGGCGATTCCGCTGCTCACGGGCCCCGGCTCGATCAGCACGGTGATCATCTATGCGG
CGAACTCGCATCACTGGTATGAGCGGGCCGGGCTGGTCGCGATCGGCGCGGTCCTGGCTTTTCTGTGTTTCGTCGCGATG
CGGCTCGCCGAGCCGATCGCGAACTGGATCGGCCGCACGGGCATCAACATCGCCACGCGGCTGATGGGTCTGATGCTGTC
GGCGCTGGCGGTGGAATTCATCGTCAATGGACTGAGGGCGCTACTGCCTGCACTGAGATGA

Upstream 100 bases:

>100_bases
GGGGCAGATCCCGTCGACGAAGGGCAGTCTCTGAACCTGAACTGACCGGACGGCGCGTCAAGGACAACCTCACGGCTTCG
GCGCACGGCGCCGGCTTGCG

Downstream 100 bases:

>100_bases
AAACTTCGATTGCGATTGTGGATTATGGGATGGGCAACCTGCGCTCGGTCGCGCAGGCGCTCAAGAAGGCCGAACCGGCC
GCCGACGTGGCGATCGTCGA

Product: multiple antibiotic resistance (MarC)-related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDAERRRTIRIASVSVFCVITVTTLLGQQIINFFGISVGSLEVGGGIIML
LMAINMLNAQIGNTRSTPEERHEAELKDNIAVVPLAIPLLTGPGSISTVIIYAANSHHWYERAGLVAIGAVLAFLCFVAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVNGLRALLPALR

Sequences:

>Translated_206_residues
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDAERRRTIRIASVSVFCVITVTTLLGQQIINFFGISVGSLEVGGGIIML
LMAINMLNAQIGNTRSTPEERHEAELKDNIAVVPLAIPLLTGPGSISTVIIYAANSHHWYERAGLVAIGAVLAFLCFVAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVNGLRALLPALR
>Mature_206_residues
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDAERRRTIRIASVSVFCVITVTTLLGQQIINFFGISVGSLEVGGGIIML
LMAINMLNAQIGNTRSTPEERHEAELKDNIAVVPLAIPLLTGPGSISTVIIYAANSHHWYERAGLVAIGAVLAFLCFVAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVNGLRALLPALR

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=38.6138613861386, Blast_Score=163, Evalue=9e-42,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=34.020618556701, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1789842, Length=201, Percent_Identity=28.3582089552239, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22122; Mature: 22122

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDAERRRTIRIASVSVFCVITVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INFFGISVGSLEVGGGIIMLLMAINMLNAQIGNTRSTPEERHEAELKDNIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEHHHHHC
TGPGSISTVIIYAANSHHWYERAGLVAIGAVLAFLCFVAMRLAEPIANWIGRTGINIATR
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMGLMLSALAVEFIVNGLRALLPALR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLLKSFISLLALINPVGAVPFFLSLTAQQTDAERRRTIRIASVSVFCVITVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INFFGISVGSLEVGGGIIMLLMAINMLNAQIGNTRSTPEERHEAELKDNIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEHHHHHC
TGPGSISTVIIYAANSHHWYERAGLVAIGAVLAFLCFVAMRLAEPIANWIGRTGINIATR
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMGLMLSALAVEFIVNGLRALLPALR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]