| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is hisD
Identifier: 78065000
GI number: 78065000
Start: 389555
End: 390871
Strand: Direct
Name: hisD
Synonym: Bcep18194_A3523
Alternate gene names: 78065000
Gene position: 389555-390871 (Clockwise)
Preceding gene: 78064999
Following gene: 78065001
Centisome position: 10.55
GC content: 69.25
Gene sequence:
>1317_bases ATGTCCATCACCATCCGCAAGCTCGATTCGACGAGCGCAGGCTTCGGCGCCGAGCTGCGCGCGCTGCTCGCATTCGAGGC GAGCGAAGACGCGGCGATCGAGCAATCGGTCGCGCAGATCCTCGCCGACGTGAAGTCGCGCGGCGACGCCGCGGTGCTCG AATACACGAACCGCTTCGACCGGCTGAGCGCGAGCAGCATTGCCGCGCTGGAGCTGCCGCAGGACGCGCTGCAGACGGCG CTCGACAGCCTCGCGCCGAAGGCGCGCGCGGCGCTGGAGGCGGCGGCCGCGCGCGTGCGCGCGTACCACGAGAAGCAGAA GATCGAGTGCGGCACGCATAGCTGGCAGTACACGGAAAGCGACGGCACGGTGCTCGGCCAGAAGGTCACGCCGCTCGACC GCGTCGGCCTGTACGTGCCGGGCGGCAAGGCCGCGTATCCGTCGTCGGTGCTGATGAACGCGATTCCCGCGCGTGTCGCG GGCGTCGGCGAGATCGTGATGGTCGTGCCGACGCCGGACGGCGTGAAGAACGATCTCGTGCTCGCCGCAGCGCTGCTCGG CGGCGTCGATCGCGTGTTCACGATCGGCGGCGCGCAGGCGGTCGGTGCGCTCGCCTACGGCACGGCGACGGTGCCGGCCG TCGACAAGATCTGCGGCCCCGGCAACGCGTACGTCGCGTCGGCGAAGCGCCGTGTGTTCGGCACGGTCGGCATCGACATG ATCGCCGGCCCGTCGGAAATTCTCGTGCTGTGCGACGGCACGACCGATCCGAACTGGGTCGCGATGGACCTGTTCTCGCA GGCCGAGCACGACGAACTCGCGCAATCGATCCTGCTGTGCCCGGACGGTGCGTTCCTCGAGCGCGTCGAAAAGGCGATCG ACGAGCTGCTGCCGTCGATGCCGCGCCAGGACGTGATCCGCGCGTCGCTCGAAGGCCGCGGCGCGCTGATCAAGGTGCGC GACATGGCCGAAGCCTGCCGGATCGCGAACGACATCGCGCCCGAGCACCTGGAAATTTCCGCGCTGGAGCCGCAGCAATG GGGCCAGCAGATCCGCCATGCGGGCGCGATCTTCCTCGGCCGCTACACGAGCGAGAGCCTCGGCGACTACTGCGCGGGCC CGAACCACGTGCTGCCGACGTCGCGCACCGCGCGTTTCTCGTCGCCGCTCGGCGTGTACGACTTCATCAAGCGCTCGAGC CTGATCGAGGTCAGTGCGGAAGGTGCACAGACGCTCGGCGAGATCGCATCCGAGCTCGCGTACGGCGAGGGGCTGCAGGC GCACGCGAAGAGCGCCGAGTTCCGGATGAAGCACTGA
Upstream 100 bases:
>100_bases TGCGCTGAAGTTGAAGCGCACGGCACTCAAGCCGATCCTCGACGCGTTCGAACGCGCGTCGCAGAATGGCGGTTGAGCGC ATCACCGTAACGGAACTCCC
Downstream 100 bases:
>100_bases CCACCCGCTGCGCGGGGCCGCGGCCGGCGCTGACGTGCCGCCCGGCCCGCTCCCGAAGGCCGGGGCTGGAGACACCTGAG CAGGGCGGCAGCCGCCGCCT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSITIRKLDSTSAGFGAELRALLAFEASEDAAIEQSVAQILADVKSRGDAAVLEYTNRFDRLSASSIAALELPQDALQTA LDSLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTESDGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGVKNDLVLAAALLGGVDRVFTIGGAQAVGALAYGTATVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDGAFLERVEKAIDELLPSMPRQDVIRASLEGRGALIKVR DMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSS LIEVSAEGAQTLGEIASELAYGEGLQAHAKSAEFRMKH
Sequences:
>Translated_438_residues MSITIRKLDSTSAGFGAELRALLAFEASEDAAIEQSVAQILADVKSRGDAAVLEYTNRFDRLSASSIAALELPQDALQTA LDSLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTESDGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGVKNDLVLAAALLGGVDRVFTIGGAQAVGALAYGTATVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDGAFLERVEKAIDELLPSMPRQDVIRASLEGRGALIKVR DMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSS LIEVSAEGAQTLGEIASELAYGEGLQAHAKSAEFRMKH >Mature_437_residues SITIRKLDSTSAGFGAELRALLAFEASEDAAIEQSVAQILADVKSRGDAAVLEYTNRFDRLSASSIAALELPQDALQTAL DSLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTESDGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAG VGEIVMVVPTPDGVKNDLVLAAALLGGVDRVFTIGGAQAVGALAYGTATVPAVDKICGPGNAYVASAKRRVFGTVGIDMI AGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDGAFLERVEKAIDELLPSMPRQDVIRASLEGRGALIKVRD MAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSL IEVSAEGAQTLGEIASELAYGEGLQAHAKSAEFRMKH
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=438, Percent_Identity=39.9543378995434, Blast_Score=281, Evalue=6e-77, Organism=Saccharomyces cerevisiae, GI6319819, Length=409, Percent_Identity=34.718826405868, Blast_Score=230, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46414; Mature: 46283
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITIRKLDSTSAGFGAELRALLAFEASEDAAIEQSVAQILADVKSRGDAAVLEYTNRFD CCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RLSASSIAALELPQDALQTALDSLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTES HCCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGVKNDLV CCCEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH LAAALLGGVDRVFTIGGAQAVGALAYGTATVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCHHEEEECCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDGAFLERVEKAIDELLPSM ECCCCEEEEEECCCCCCCEEEHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCC PRQDVIRASLEGRGALIKVRDMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLG CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSLIEVSAEGAQTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH YGEGLQAHAKSAEFRMKH HCCCCHHHHCCCCCCCCC >Mature Secondary Structure SITIRKLDSTSAGFGAELRALLAFEASEDAAIEQSVAQILADVKSRGDAAVLEYTNRFD CEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RLSASSIAALELPQDALQTALDSLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTES HCCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGVKNDLV CCCEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH LAAALLGGVDRVFTIGGAQAVGALAYGTATVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCHHEEEECCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDGAFLERVEKAIDELLPSM ECCCCEEEEEECCCCCCCEEEHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCC PRQDVIRASLEGRGALIKVRDMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLG CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSLIEVSAEGAQTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH YGEGLQAHAKSAEFRMKH HCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA