Click here to switch to the map view.

The map label for this gene is ugpQ

Identifier: 78064973

GI number: 78064973

Start: 360072

End: 360842

Strand: Direct

Name: ugpQ

Synonym: Bcep18194_A3496

Alternate gene names: 78064973

Gene position: 360072-360842 (Clockwise)

Preceding gene: 78064972

Following gene: 78064975

Centisome position: 9.75

GC content: 70.3

Gene sequence:

>771_bases
ATGACAACCCGTACCGACTGGCCTTATCCGCGCGTCGTCGCCCATCGCGGCGGCGGCACGCTCGCGCCGGAGAACACGCT
CGCCGCGCTTGACGAGGGCGCGCGCCGTGGCCACCGGATGGTCGAGTTCGATGCGAAGCTGTCGGCCGACGACGTGACGT
TCCTGCTGCACGACGACACGGTCGACCGCACGTCGAACGGTCACGGCGCGGCGGCGGGCATGCGTTACGACGCGCTGGCC
GCACTCGATGCGGGCGCGTGGTGCGATGCGCGCTTCGCGGGCGAGCGGATGCCGACGCTTGAGGCCGCGGCGGCGCGCTG
CATCGCCCACGGGCTGGCCGCGAATGTCGAGATCAAGCCGTGTCCGGGACGCGAGCGCGAGACGGGGCAGCGCGTGGCGG
CCGACGCGGCCGCGTACTGGCGTGATGCCGCGATTCCGCCGCTCCTGTCGTCGTTCTCGTTCGATGCACTGCACCAGGCG
CGCGCGACGATGCCGGCGCTGCCGCGCGGGATGCTCTACGAGGCCGTGCCGGACGACTGGCATGCGCAAGTCGTCGGCGC
GCTCGGCTGTGTTTCGTTGCATGCAGACCACAAACAGCTCGACGAACCGCTCGTGCGCGCGATCAAGGCGGCCGGGCTGC
GCATCCTGGTTTACACGGTGAACGACCTCGAACGGGCACGCGAACTCGCGCGCTGGGGTGTCGATGCGGTCTGCACGGAC
CGCATCGACCTGATTGCCCCCGATGCGCTGGACGACATCGACATCGTCTGA

Upstream 100 bases:

>100_bases
GCGCTGGCGGCCGCGTTGCCCGCGCACCGGCTGCATTTCTTCGATCCCGAGACCGGCAAGCGTGCCGGCTGAACCTGCTG
CACCTGCCGAGACACCGACG

Downstream 100 bases:

>100_bases
CGGCCGCGCCTGCGGCCGCCGAAACCCGTGTCGGGAACGTAACTGACGCGAAAAAACGACGCCCCGACGGGATTCCCGCC
GGGGCGTTTCGCATCGTGGA

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTTRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVDRTSNGHGAAAGMRYDALA
ALDAGAWCDARFAGERMPTLEAAAARCIAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAIPPLLSSFSFDALHQA
RATMPALPRGMLYEAVPDDWHAQVVGALGCVSLHADHKQLDEPLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
RIDLIAPDALDDIDIV

Sequences:

>Translated_256_residues
MTTRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVDRTSNGHGAAAGMRYDALA
ALDAGAWCDARFAGERMPTLEAAAARCIAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAIPPLLSSFSFDALHQA
RATMPALPRGMLYEAVPDDWHAQVVGALGCVSLHADHKQLDEPLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
RIDLIAPDALDDIDIV
>Mature_255_residues
TTRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVDRTSNGHGAAAGMRYDALAA
LDAGAWCDARFAGERMPTLEAAAARCIAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAIPPLLSSFSFDALHQAR
ATMPALPRGMLYEAVPDDWHAQVVGALGCVSLHADHKQLDEPLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTDR
IDLIAPDALDDIDIV

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=157, Percent_Identity=30.5732484076433, Blast_Score=88, Evalue=6e-18,
Organism=Escherichia coli, GI1789858, Length=244, Percent_Identity=54.5081967213115, Blast_Score=269, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27653; Mature: 27522

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDT
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCC
VDRTSNGHGAAAGMRYDALAALDAGAWCDARFAGERMPTLEAAAARCIAHGLAANVEIKP
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEC
CPGRERETGQRVAADAAAYWRDAAIPPLLSSFSFDALHQARATMPALPRGMLYEAVPDDW
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCH
HAQVVGALGCVSLHADHKQLDEPLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCEECC
RIDLIAPDALDDIDIV
CCCEECCCCCCCCCCC
>Mature Secondary Structure 
TTRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDT
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCC
VDRTSNGHGAAAGMRYDALAALDAGAWCDARFAGERMPTLEAAAARCIAHGLAANVEIKP
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEC
CPGRERETGQRVAADAAAYWRDAAIPPLLSSFSFDALHQARATMPALPRGMLYEAVPDDW
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCH
HAQVVGALGCVSLHADHKQLDEPLVRAIKAAGLRILVYTVNDLERARELARWGVDAVCTD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCEECC
RIDLIAPDALDDIDIV
CCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]