| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is engB
Identifier: 78064955
GI number: 78064955
Start: 340301
End: 340960
Strand: Reverse
Name: engB
Synonym: Bcep18194_A3478
Alternate gene names: 78064955
Gene position: 340960-340301 (Counterclockwise)
Preceding gene: 78064963
Following gene: 78064954
Centisome position: 9.23
GC content: 63.64
Gene sequence:
>660_bases ATGGCCTTTCTGCTCCATCAAGCCCGCTTCTACACGACCGTCAACCATCTGCGCGACCTGCCGCCGACGGTCCAGCCGGA AATCGCGTTCGCGGGCCGCTCGAATGCCGGCAAGTCGACGGCGATCAACGTGCTGTGCAACCAGAAGCGGCTCGCCTTCG CGTCGAAGACGCCCGGCCGCACGCAGCATATCAACTACTTCTCCGTCGGCCCGGCCGACGAGCCCGTCGCGAATCTCGTC GACCTGCCCGGCTACGGCTACGCGGAAGTGCCCGGTGCCGCCAAGGCCCACTGGGAAATGCTGCTGTCGTCCTACCTCGC GACCCGTTCGCAGCTTTGCGGCCTGATTCTGATGATGGATTCGCGCCGTCCGCTGACCGACCTCGATCGCCGCATGATCG AGTGGTTCGTGCCGACCGGCAAGCCGATCCACACGCTGCTGACGAAGTGCGACAAATTGACGCGGCAGGAAAGCATCAAC GCGCTGAGGACCGCGCAAAAGGGTCTCGATGCGTATCGTGACCAGGGCGTCCAGGGCAAGCTGACGGTTCAGCTGTTCTC GGCGATGAAGCGCGTTGGGCTCGACGAGGCGCACGAATTGATCGAAAGCTGGGTGCGGCCGTCCGTCGCCGACGAAAAAA GCGAGCCTGTAGCACAATGA
Upstream 100 bases:
>100_bases AAACCGCCGTATTGTACAATATCGTGTTGAAAGCTCCCGCGCCTATCGGGGCTACCCCGCCTCCACCAAGCGGCTCGCGC CGCCCGTCCTTCCGGTTCCC
Downstream 100 bases:
>100_bases TCGGGCAACGCGCGGCCGGGATCGGCGGCGCGCACCTGACGGCGCCTGCGGTTTCGGCCGGCTCATAAAAAAACCCGCCG TTGAACGGCGGGTCAAACAG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAFLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPADEPVANLV DLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESIN ALRTAQKGLDAYRDQGVQGKLTVQLFSAMKRVGLDEAHELIESWVRPSVADEKSEPVAQ
Sequences:
>Translated_219_residues MAFLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPADEPVANLV DLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESIN ALRTAQKGLDAYRDQGVQGKLTVQLFSAMKRVGLDEAHELIESWVRPSVADEKSEPVAQ >Mature_218_residues AFLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPADEPVANLVD LPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESINA LRTAQKGLDAYRDQGVQGKLTVQLFSAMKRVGLDEAHELIESWVRPSVADEKSEPVAQ
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=159, Percent_Identity=31.4465408805031, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI145693205, Length=202, Percent_Identity=45.049504950495, Blast_Score=171, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 24390; Mature: 24259
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGR CCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHEEHEEECCHHHHHCCCCCCC TQHINYFSVGPADEPVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMD CEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEC SRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESINALRTAQKGLDAYRDQGVQGK CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LTVQLFSAMKRVGLDEAHELIESWVRPSVADEKSEPVAQ HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AFLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGR CHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHEEHEEECCHHHHHCCCCCCC TQHINYFSVGPADEPVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMD CEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEC SRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESINALRTAQKGLDAYRDQGVQGK CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH LTVQLFSAMKRVGLDEAHELIESWVRPSVADEKSEPVAQ HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA