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The map label for this gene is ydfM [H]

Identifier: 78064862

GI number: 78064862

Start: 245029

End: 246186

Strand: Direct

Name: ydfM [H]

Synonym: Bcep18194_A3385

Alternate gene names: 78064862

Gene position: 245029-246186 (Clockwise)

Preceding gene: 78064861

Following gene: 78064866

Centisome position: 6.63

GC content: 66.49

Gene sequence:

>1158_bases
ATGTCCACGTTTTCCGGCGACGCGCAGAGCGCAGATAAGCACGCGGTTGCACGCAAGAGCACGTTCGTCAGTATTGTGCT
GAATGTCGTGCTTGCGACATTTCAGATCGTCGTCGGCGTGATTGCACATTCGCAGGCATTGATTGCTGACGGTGTGCATT
CGATTTCCGATTTGATCTCGGATTTTGTCGTGCTGGTTGCGAATCGGCATAGCGGCGCATCGCCGGATGCCGACCACAAT
TACGGACACAGCCGCTACGAGACCGTCGCCTCGCTGTTTCTCGGCGCGATCCTGATTGCGGTTGGCGTCGGCATGCTCTG
GCGGGCCGGCGACCGTCTCGTTAATCTCGAAAACATTCCGGCGGTACATTTTTCCGCGCTGCTCGTCGCGCTGACGGTGC
TCGTGTCGAAAGAGGCGCTGTTTCGCTACATGCTGCGCGAAGCGCGGCGCGTCCGCTCGGCGATGCTCGTCGCGAACGCG
TGGCATGCGCGTTCGGATGCCGCATCGTCGCTCGTCGTCGCGATCGGCATCGTCGGCAGCCTGGCCGGCGTGCGGCTGCT
CGACCCGATCGCGGCGGCGATCGTCGGCTTCATGGTCGCGCGCATGGGCTGGACGTTCGGCTATGACGCGCTGCAGGACC
TCTCCGACCGCGCGCTCGACACGACCGATACGGCCGAGATCCGCGCGCTGCTCGCGGCGACGCCCGGCGTGCGTGACGTG
CATGACCTGCGCACGCGCAAGATGGGCGATGCCGCGCTCGTCGACGCGCACATCCTCGTCGACCCGAAAATCTCCGTCTC
CGAAGGGCACTACATCGCCGAGACCGCGCGTGCGCGCGTGCTGACCGACCCGCGCGTGCTCGATGCGCTGATCCACGTCG
ATCCCGAGAACGACGCGGCGCGCCGTCCGGCGCTCGCGCTGCCGCCGCGCGGCGAGATCGCGGCACGGCTCGAGGCCGCG
CTCGCGCAGCGAGGGCTGCATGCGGCGGCCATCAACCTGCATTACCTGAGTACGGGGCTCGAGATCGACGTGACGCTTGC
TTGCGATCCGCACGACACCGATGCGGCGCTGGCCGGCCGGCTCGACGCCGATGCGTTGAAGCGCGAGTTCGGCGCGCGCC
GGATCGGCTTCACGCGCACGATGCCCGCGCAGACGTGA

Upstream 100 bases:

>100_bases
GCATAAGCGGTTGATTTAAATAAGAAATTTGTGGGTATTGGCCGGGTTCACCGGGCGCCCTTGATAGAATTGGGTATCGC
ACACCGATATCCAATATTTC

Downstream 100 bases:

>100_bases
CCGGCCGCGGGCACGCGTGGCGGCGGGCCGCCGGCGCGCGCGTTACAGCGGCAGTTGCGTGTCGAACTTGATTTCGCGCA
GCACGACGCTCGTGCGCACC

Product: cation efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSTFSGDAQSADKHAVARKSTFVSIVLNVVLATFQIVVGVIAHSQALIADGVHSISDLISDFVVLVANRHSGASPDADHN
YGHSRYETVASLFLGAILIAVGVGMLWRAGDRLVNLENIPAVHFSALLVALTVLVSKEALFRYMLREARRVRSAMLVANA
WHARSDAASSLVVAIGIVGSLAGVRLLDPIAAAIVGFMVARMGWTFGYDALQDLSDRALDTTDTAEIRALLAATPGVRDV
HDLRTRKMGDAALVDAHILVDPKISVSEGHYIAETARARVLTDPRVLDALIHVDPENDAARRPALALPPRGEIAARLEAA
LAQRGLHAAAINLHYLSTGLEIDVTLACDPHDTDAALAGRLDADALKREFGARRIGFTRTMPAQT

Sequences:

>Translated_385_residues
MSTFSGDAQSADKHAVARKSTFVSIVLNVVLATFQIVVGVIAHSQALIADGVHSISDLISDFVVLVANRHSGASPDADHN
YGHSRYETVASLFLGAILIAVGVGMLWRAGDRLVNLENIPAVHFSALLVALTVLVSKEALFRYMLREARRVRSAMLVANA
WHARSDAASSLVVAIGIVGSLAGVRLLDPIAAAIVGFMVARMGWTFGYDALQDLSDRALDTTDTAEIRALLAATPGVRDV
HDLRTRKMGDAALVDAHILVDPKISVSEGHYIAETARARVLTDPRVLDALIHVDPENDAARRPALALPPRGEIAARLEAA
LAQRGLHAAAINLHYLSTGLEIDVTLACDPHDTDAALAGRLDADALKREFGARRIGFTRTMPAQT
>Mature_384_residues
STFSGDAQSADKHAVARKSTFVSIVLNVVLATFQIVVGVIAHSQALIADGVHSISDLISDFVVLVANRHSGASPDADHNY
GHSRYETVASLFLGAILIAVGVGMLWRAGDRLVNLENIPAVHFSALLVALTVLVSKEALFRYMLREARRVRSAMLVANAW
HARSDAASSLVVAIGIVGSLAGVRLLDPIAAAIVGFMVARMGWTFGYDALQDLSDRALDTTDTAEIRALLAATPGVRDVH
DLRTRKMGDAALVDAHILVDPKISVSEGHYIAETARARVLTDPRVLDALIHVDPENDAARRPALALPPRGEIAARLEAAL
AQRGLHAAAINLHYLSTGLEIDVTLACDPHDTDAALAGRLDADALKREFGARRIGFTRTMPAQT

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=261, Percent_Identity=24.904214559387, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325032, Length=227, Percent_Identity=29.5154185022026, Blast_Score=105, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6323831, Length=239, Percent_Identity=30.5439330543933, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 41095; Mature: 40963

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHCCHHCCCCCCCCCCC
>Mature Secondary Structure 
STFSGDAQSADKHAVARKSTFVSIVLNVVLATFQIVVGVIAHSQALIADGVHSISDLIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFVVLVANRHSGASPDADHNYGHSRYETVASLFLGAILIAVGVGMLWRAGDRLVNLENIP
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
AVHFSALLVALTVLVSKEALFRYMLREARRVRSAMLVANAWHARSDAASSLVVAIGIVGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LAGVRLLDPIAAAIVGFMVARMGWTFGYDALQDLSDRALDTTDTAEIRALLAATPGVRDV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHH
HDLRTRKMGDAALVDAHILVDPKISVSEGHYIAETARARVLTDPRVLDALIHVDPENDAA
HHHHHHCCCCHHEEEEEEEECCCEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
RRPALALPPRGEIAARLEAALAQRGLHAAAINLHYLSTGLEIDVTLACDPHDTDAALAGR
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHEEEEEEEECCCEEEEEEEECCCCCCHHHHCC
LDADALKREFGARRIGFTRTMPAQT
CCHHHHHHHHCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]