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The map label for this gene is 78064828

Identifier: 78064828

GI number: 78064828

Start: 208595

End: 208891

Strand: Direct

Name: 78064828

Synonym: Bcep18194_A3351

Alternate gene names: NA

Gene position: 208595-208891 (Clockwise)

Preceding gene: 78064826

Following gene: 78064830

Centisome position: 5.65

GC content: 62.96

Gene sequence:

>297_bases
ATGTCTCAATACGCGAAACTCAAGGCGCAGATCGCCGATCTGCAGGCCCAGGCGGACGATGTGCGCCGCCAGGAAGTGGC
GGCGGTGATTGCGGAAGTCCAGCAAAAGATTGCCGAATATGGGCTGACTGCCCAGGATCTGGGCTTCGCGGAGCGAGCGA
AGCGCGGGCGCCCGCCGAAGAAGGCGCCGCTACCCCCGAAATACCGCGATCCGAAGTCGGGCGCGACCTGGAGCGGGCGA
GGCAAGCCGCCGAATTGGATCGTCGGTAAAAACCGCGATCGTTTCGTCATCGAATGA

Upstream 100 bases:

>100_bases
TTAAATTCGAAGGGCAGGGCGGCAGTGCGGATGGCGTAACGGATGTTGGTGTCCCGGCTGGATTCGCCGGGGCCGCATCA
TCGAAAAGGGGAGTCGAAAA

Downstream 100 bases:

>100_bases
CCGAAAACCCAAACAAAAGAGCCGCATCGAGATGCGGCTCTTTTGATTTGCGCGCCGATTCCGGCACGGATTGGATTACG
GAATATTTCCTCGCGGAATT

Product: histone-like nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Hns-Like Protein; H-NS-Like Proteins; H-NS-Like Protein; Nucleoid Protein H-NS; Histone-Like Nucleoid-Structuring Protein H-Ns; HNS-Like Transcriptional Regulator; H-NS Histone-Like Protein; H-NS-Like Transcription Regulator; Histone Family Protein Nucleoid-Structuring Protein H-Ns; HNS-Like Transcription Regulator Protein

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSQYAKLKAQIADLQAQADDVRRQEVAAVIAEVQQKIAEYGLTAQDLGFAERAKRGRPPKKAPLPPKYRDPKSGATWSGR
GKPPNWIVGKNRDRFVIE

Sequences:

>Translated_98_residues
MSQYAKLKAQIADLQAQADDVRRQEVAAVIAEVQQKIAEYGLTAQDLGFAERAKRGRPPKKAPLPPKYRDPKSGATWSGR
GKPPNWIVGKNRDRFVIE
>Mature_97_residues
SQYAKLKAQIADLQAQADDVRRQEVAAVIAEVQQKIAEYGLTAQDLGFAERAKRGRPPKKAPLPPKYRDPKSGATWSGRG
KPPNWIVGKNRDRFVIE

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10944; Mature: 10812

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYAKLKAQIADLQAQADDVRRQEVAAVIAEVQQKIAEYGLTAQDLGFAERAKRGRPPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCC
KAPLPPKYRDPKSGATWSGRGKPPNWIVGKNRDRFVIE
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECC
>Mature Secondary Structure 
SQYAKLKAQIADLQAQADDVRRQEVAAVIAEVQQKIAEYGLTAQDLGFAERAKRGRPPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCC
KAPLPPKYRDPKSGATWSGRGKPPNWIVGKNRDRFVIE
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA