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The map label for this gene is ydgJ [H]

Identifier: 78064804

GI number: 78064804

Start: 174500

End: 175552

Strand: Reverse

Name: ydgJ [H]

Synonym: Bcep18194_A3327

Alternate gene names: 78064804

Gene position: 175552-174500 (Counterclockwise)

Preceding gene: 78064805

Following gene: 78064803

Centisome position: 4.75

GC content: 70.85

Gene sequence:

>1053_bases
ATGTCGTCATTGCTCAGGATTGGTTTGATGGGTTTCGGTTTCGCCGGCGCGACGTTCCACGCGCCCGTGATCGCCACGAG
CGGCCGCACTGAAGTCGCCGCGATCGCGACGGGGCAGCCCGATCGCGCGCAGGCGGCGTATCCGGGCGCGCGCGTCGTCC
CCGATCTCGACACGCTGCTCGGCCTCGACGACATCGAGTGCGTGGTGATCGCCACGCCGAACGACACGCACTTCGCGCTC
GCACGCCAGGTGCTCGAAGCCGGCCGCCACGTGGTCGTCGACAAGCCCGTCACGCTCACCGCCGACGAGGCGCTCGCGCT
CGCGCGGCTCGCGAATGCGCGCAGCCGGCTGTTCGCGCCGTTCCACAACCGCCGCTGGGACGGCGATTTCCTCACCGTGC
GCCGCATCGTCGAATCGGGCGAGCTCGGCCGGCTGACCTGTTTCGAATCGCACTTCGACCGCTTCCGCCCGACGCCGCGC
ACGCGCTGGCGCGAGGAGCCCGCCCGTGGTGGCGGCCTGCTGCTCGACCTCGGCCCGCACCTGATCGACCAGGCGCTTGC
GCTGTTCGGCCTGCCGGAAACGGTGAGCGCGACCGTCAAGACGCGCCGCGACAACGGCACGGCGCCCGATTTCGTGCACC
TGCAGCTCGGCTATCCGGACAAGGACGTCGCGCTGCATGCGAGCGCGCTGTCGGCGATCGAACCCGCGCGCTTCACGCTG
CACGGCACCCGCGGCAGCTATCAGAAGTTCGGGCTCGACACGCAGGAGGACCAGCTCAAGGCCGGCCTCACCACGGACGA
CGTCGAATTCGGCGGCGGCAACCCGCCCGGCCTGCTGCGCGTGCTCGACGGCGAAGTCGAGGTCGAGCGCCCGGTGCCGA
CGCTCGACGGCCAGTACGCGGAGTTCTACCGCGCGCTCGCCGCGTCGATCCACGACGGCGCGCCGTTCCCCGTCACCGCG
CAGGACGCCGTCGACGTGATGACGATCATCGAACTCGCCGCGCAGAGCGAGCACGACGGCCGCCGGCTGCCGTTCGTACG
GCGCACGATCTGA

Upstream 100 bases:

>100_bases
ACGCGCCAGTGCAAGCGGCGGCGCCATGCCAAAATAGCCGGTCGTCTTCGCGCCGTCTCGGCGCACCGTCCTTTAGTTTC
CTTCGCAGCCAGGGATTGCC

Downstream 100 bases:

>100_bases
CACCGCGCGCGGGCCGGTAGCGGCCGGCCCGCGCGGGTGCGCGTGGACCAACCGGAACATTCGGTTACAAATGCCGGGGG
AACGAAAGTCAGCGGTAGAC

Product: oxidoreductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSSLLRIGLMGFGFAGATFHAPVIATSGRTEVAAIATGQPDRAQAAYPGARVVPDLDTLLGLDDIECVVIATPNDTHFAL
ARQVLEAGRHVVVDKPVTLTADEALALARLANARSRLFAPFHNRRWDGDFLTVRRIVESGELGRLTCFESHFDRFRPTPR
TRWREEPARGGGLLLDLGPHLIDQALALFGLPETVSATVKTRRDNGTAPDFVHLQLGYPDKDVALHASALSAIEPARFTL
HGTRGSYQKFGLDTQEDQLKAGLTTDDVEFGGGNPPGLLRVLDGEVEVERPVPTLDGQYAEFYRALAASIHDGAPFPVTA
QDAVDVMTIIELAAQSEHDGRRLPFVRRTI

Sequences:

>Translated_350_residues
MSSLLRIGLMGFGFAGATFHAPVIATSGRTEVAAIATGQPDRAQAAYPGARVVPDLDTLLGLDDIECVVIATPNDTHFAL
ARQVLEAGRHVVVDKPVTLTADEALALARLANARSRLFAPFHNRRWDGDFLTVRRIVESGELGRLTCFESHFDRFRPTPR
TRWREEPARGGGLLLDLGPHLIDQALALFGLPETVSATVKTRRDNGTAPDFVHLQLGYPDKDVALHASALSAIEPARFTL
HGTRGSYQKFGLDTQEDQLKAGLTTDDVEFGGGNPPGLLRVLDGEVEVERPVPTLDGQYAEFYRALAASIHDGAPFPVTA
QDAVDVMTIIELAAQSEHDGRRLPFVRRTI
>Mature_349_residues
SSLLRIGLMGFGFAGATFHAPVIATSGRTEVAAIATGQPDRAQAAYPGARVVPDLDTLLGLDDIECVVIATPNDTHFALA
RQVLEAGRHVVVDKPVTLTADEALALARLANARSRLFAPFHNRRWDGDFLTVRRIVESGELGRLTCFESHFDRFRPTPRT
RWREEPARGGGLLLDLGPHLIDQALALFGLPETVSATVKTRRDNGTAPDFVHLQLGYPDKDVALHASALSAIEPARFTLH
GTRGSYQKFGLDTQEDQLKAGLTTDDVEFGGGNPPGLLRVLDGEVEVERPVPTLDGQYAEFYRALAASIHDGAPFPVTAQ
DAVDVMTIIELAAQSEHDGRRLPFVRRTI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=336, Percent_Identity=44.047619047619, Blast_Score=285, Evalue=4e-78,
Organism=Escherichia coli, GI1789848, Length=333, Percent_Identity=33.033033033033, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787574, Length=210, Percent_Identity=27.6190476190476, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24581117, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38013; Mature: 37882

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLLRIGLMGFGFAGATFHAPVIATSGRTEVAAIATGQPDRAQAAYPGARVVPDLDTLL
CCCHHHHHHHHCCCCCCEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
GLDDIECVVIATPNDTHFALARQVLEAGRHVVVDKPVTLTADEALALARLANARSRLFAP
CCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCC
FHNRRWDGDFLTVRRIVESGELGRLTCFESHFDRFRPTPRTRWREEPARGGGLLLDLGPH
HHCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHH
LIDQALALFGLPETVSATVKTRRDNGTAPDFVHLQLGYPDKDVALHASALSAIEPARFTL
HHHHHHHHHCCCHHHHHHEEECCCCCCCCCEEEEEECCCCCHHEEEHHHHHHCCCCEEEE
HGTRGSYQKFGLDTQEDQLKAGLTTDDVEFGGGNPPGLLRVLDGEVEVERPVPTLDGQYA
ECCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCHHH
EFYRALAASIHDGAPFPVTAQDAVDVMTIIELAAQSEHDGRRLPFVRRTI
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
SSLLRIGLMGFGFAGATFHAPVIATSGRTEVAAIATGQPDRAQAAYPGARVVPDLDTLL
CCHHHHHHHHCCCCCCEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
GLDDIECVVIATPNDTHFALARQVLEAGRHVVVDKPVTLTADEALALARLANARSRLFAP
CCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCC
FHNRRWDGDFLTVRRIVESGELGRLTCFESHFDRFRPTPRTRWREEPARGGGLLLDLGPH
HHCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHH
LIDQALALFGLPETVSATVKTRRDNGTAPDFVHLQLGYPDKDVALHASALSAIEPARFTL
HHHHHHHHHCCCHHHHHHEEECCCCCCCCCEEEEEECCCCCHHEEEHHHHHHCCCCEEEE
HGTRGSYQKFGLDTQEDQLKAGLTTDDVEFGGGNPPGLLRVLDGEVEVERPVPTLDGQYA
ECCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCHHH
EFYRALAASIHDGAPFPVTAQDAVDVMTIIELAAQSEHDGRRLPFVRRTI
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]