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The map label for this gene is yhfM [C]

Identifier: 78064785

GI number: 78064785

Start: 151012

End: 152424

Strand: Direct

Name: yhfM [C]

Synonym: Bcep18194_A3308

Alternate gene names: 78064785

Gene position: 151012-152424 (Clockwise)

Preceding gene: 78064784

Following gene: 78064786

Centisome position: 4.09

GC content: 66.1

Gene sequence:

>1413_bases
ATGAAAGCAGAGTCGAATGGCCGGCCCGCCGCCGGCGCCAAGTCGTCCGGCCAGCCCGCGCTGCAGCAGACGCTCGGGAC
CTGGCAACTGTGGGGCATTGCGGTCGGCCTCGTGATTTCCGGCGAATACTTCGGCTGGAGTTACGGCTGGGCAAGCGCCG
GCACGCTGGGTTTCGTCGTCACCGCGCTGTTCGTCGCGGCGATGTACACGACCTTCATTTTCAGTTTCACCGAGCTGACG
ACGTCGATCCCGCACGCGGGCGGCCCGTTCGCGTATGCGCGCCGTGCGTTCGGCCCGACCGGCGGCTATCTCGCCGGTGC
CGCGACACTCGTCGAGTTCGTGTTCGCACCGCCCGCGATCGCGCTTGCGATCGGCGCTTACCTGCACGTGCAGTTCCCCG
GCCTCGAGCCCAAGCATGCGGCGATGGGTGCGTATCTCGTGTTCATGGCGCTGAACATCGTCGGCGTCCAGATCGCGGCC
ACCTTCGAGCTGGTCGTCACGCTGCTCGCGATCTTCGAGCTGCTGGTGTTCATGGGCGTCGTGTCGCCGGGCTTCGCGTG
GAGCAACTTCATGAAGGGCGGCTGGTCGGGCGCCGATCATTTCAGCGTGGGCGCGTTCCACGGGATGTTCGCGGCGATCC
CGTTCGCGATCTGGTTCTTCCTCGCGATCGAAGGCGTCGCAATGGCCGCCGAGGAAGCGAAGAACCCGAAGCGCTCGATT
CCGATCGCCTACGTGGCCGGGATCCTGACCCTCGTTGCGCTGGCGATCGGCGTGATGGTGTTCGCCGGCGGCGCGGGCGA
CTGGACCAAGCTCGCGAACATCAACGACCCGCTGCCGCAGGCGATGAAGTACATCGTCGGCGCGAACAGCGGCTGGATGC
ACATGCTCGTGTGGCTCGGGCTGTTCGGGCTGGTCGCGTCGTTCCACGGGATCATCCTCGGCTATTCGCGCCAGATCTTC
GCGCTGGCCCGCGAAGGCTACCTGCCCGAATGGCTGGCGAAGGTGCATCCGCGCTTCAAGACGCCTTACCGCGCGATCCT
CGCGGGCGGCGTGGTCGGCATCGCGGCGATCTACAGCGACGAGCTGATCCAGTTCGGCGGGCAGACGCTGACCGCGAATA
TCGTGACGATGTCGGTATTCGGTGCGATCGTGATGTATATCGTGAGCATGGCGTCGCTGTTCAAGCTGCGCCGCTCGCAG
CCGAATCTCGAACGGCCGTTCCGCGCGCCGCTGTACCCGATCTTCCCGGCGTTCGCGATCCTGGCCGCGCTCGTCTGTCT
CGCGACGATGGTGGTCTTCAACGGGCTGGTCGCGCTGGTGTTCCTCGGCTTCCTCGCGTTCGGCTACGCGTACTTCCTCG
CGACGCGTTCGCAGCGTGCAAGTGCGCCGGGCGACGTGCTGCTGGAGGAGTGA

Upstream 100 bases:

>100_bases
ATCTTTGCCGAATTTCGATAACACGTCGTTTAATGACTCTCTAGCATCGATTCTCAGTCGCGCAGGCCGCCAGGCCCGGC
GCCTTTGAGGAGAGAGTCCG

Downstream 100 bases:

>100_bases
GCAGGATGAAGGTGAACGGCCGTCCCTGACGGCATCCGGCGCGCCCCGTCGAACGGGCGCGCCGTCGGCTTTTGGCAAGG
AGACTCGCAGATGTCCTATA

Product: putative amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKAESNGRPAAGAKSSGQPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELT
TSIPHAGGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAA
TFELVVTLLAIFELLVFMGVVSPGFAWSNFMKGGWSGADHFSVGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSI
PIAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIF
ALAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMASLFKLRRSQ
PNLERPFRAPLYPIFPAFAILAALVCLATMVVFNGLVALVFLGFLAFGYAYFLATRSQRASAPGDVLLEE

Sequences:

>Translated_470_residues
MKAESNGRPAAGAKSSGQPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELT
TSIPHAGGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAA
TFELVVTLLAIFELLVFMGVVSPGFAWSNFMKGGWSGADHFSVGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSI
PIAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIF
ALAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMASLFKLRRSQ
PNLERPFRAPLYPIFPAFAILAALVCLATMVVFNGLVALVFLGFLAFGYAYFLATRSQRASAPGDVLLEE
>Mature_470_residues
MKAESNGRPAAGAKSSGQPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVVTALFVAAMYTTFIFSFTELT
TSIPHAGGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAA
TFELVVTLLAIFELLVFMGVVSPGFAWSNFMKGGWSGADHFSVGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSI
PIAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIF
ALAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMASLFKLRRSQ
PNLERPFRAPLYPIFPAFAILAALVCLATMVVFNGLVALVFLGFLAFGYAYFLATRSQRASAPGDVLLEE

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=383, Percent_Identity=25.5874673629243, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4507047, Length=230, Percent_Identity=29.1304347826087, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI187423910, Length=498, Percent_Identity=22.4899598393574, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI7657591, Length=498, Percent_Identity=22.4899598393574, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87082250, Length=463, Percent_Identity=24.1900647948164, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87081869, Length=389, Percent_Identity=23.3933161953728, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87082023, Length=339, Percent_Identity=25.9587020648968, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI2367353, Length=332, Percent_Identity=25.6024096385542, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786789, Length=345, Percent_Identity=22.6086956521739, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790653, Length=365, Percent_Identity=22.7397260273973, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1786302, Length=398, Percent_Identity=22.3618090452261, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786602, Length=336, Percent_Identity=20.2380952380952, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081708, Length=476, Percent_Identity=22.6890756302521, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17540018, Length=440, Percent_Identity=24.3181818181818, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17568033, Length=430, Percent_Identity=24.8837209302326, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17532491, Length=403, Percent_Identity=25.0620347394541, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24667468, Length=364, Percent_Identity=23.9010989010989, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666159, Length=443, Percent_Identity=23.7020316027088, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281366235, Length=430, Percent_Identity=23.7209302325581, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI116007820, Length=430, Percent_Identity=23.7209302325581, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221512776, Length=443, Percent_Identity=23.7020316027088, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007818, Length=417, Percent_Identity=24.220623501199, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85725152, Length=417, Percent_Identity=24.220623501199, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50172; Mature: 50172

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]