Click here to switch to the map view.

The map label for this gene is gidA

Identifier: 78064752

GI number: 78064752

Start: 109467

End: 111437

Strand: Direct

Name: gidA

Synonym: Bcep18194_A3275

Alternate gene names: 78064752

Gene position: 109467-111437 (Clockwise)

Preceding gene: 78064751

Following gene: 78064753

Centisome position: 2.96

GC content: 64.99

Gene sequence:

>1971_bases
ATGCTTTTTCCCACAGAATTTGACGTCATCGTCGTCGGTGGCGGCCACGCCGGCACCGAAGCCGCGCTGGCGTCCGCCCG
CATGGGCGCAAAGACACTGCTGCTGACCCACAACATTGAAACGCTTGGGCAGATGAGCTGCAATCCGTCGATCGGCGGCA
TTGGCAAGGGCCATCTGGTCAAGGAAGTCGATGCGCTGGGCGGCGCAATGGCGGCCGCGACGGACGAGAGCGGTATTCAG
TTCCGGATCCTCAATTCGTCGAAGGGCCCGGCCGTGCGCGCGACGCGTGCGCAGGCCGATCGCATTCTGTACAAGGCCGC
GATCCGCCATCGGCTCGAGAATCAGCCGAATCTCTGGCTGTTCCAGCAGGCCGTCGACGACCTGATGGTCGAAGGCGACC
GCGTGGTGGGCGCCGTCACGCAGATCGGCATCCGTTTCCGCGCCCGTGCGGTCGTGCTGACCGCCGGTACGTTCCTCGAC
GGCAAGATCCACGTCGGCCTGAACAACTACACGGGCGGTCGCGCGGGCGATCCGGCGGCCGTGTCGCTGTCGTCGCGCCT
GAAGGAACTGAAGCTGCCGCAGGGCCGCCTGAAGACCGGTACGCCGCCGCGTATCGATGGCCGCTCGATCGATTTCTCGC
AGCTGACCGAACAGCCGGGCGATCTCGATCCGGTCCCCGTCTTCTCGTTCCTGGGCCGCGCGGAGCAGCATCCGCAGCAG
CTGCCGTGCTGGGTGACGCATACGAACGAGCGCACGCACGACATCATTCGTGGCGGTCTCGACCGTTCGCCTATGTATAC
AGGCGTGATCGAAGGCGTCGGGCCGCGCTATTGCCCGTCGATCGAGGACAAGATCCACCGGTTCGCATCGAAGGAATCGC
ACCAGATCTTCCTGGAGCCGGAAGGGCTGACGACCAACGAGTTCTACCCGAACGGGATCTCGACGAGCCTGCCGTTCGAC
GTCCAGCTCGAGCTCGTGCATTCGATGCGTGGCCTCGAGAACGCGCATATCCTGCGCCCCGGCTACGCGATCGAGTACGA
CTACTTCGACCCGCGCGCGCTGAAGGCGTCGCTCGAGACGAAGGCGATCAACGGGCTGTTCTTTGCGGGCCAGATCAACG
GTACGACCGGCTATGAAGAAGCGGCCGCGCAGGGTCTGCTGGCCGGCCTCAATGCGGGCCGCTATGTGCAGGAGAAGGAC
GCATGGTGCCCGCGCCGTGACCAGGCCTACCTTGGCGTGCTGGTCGACGATCTCGTGACGCGTGGTGTGGCCGAGCCGTA
CCGGATGTTCACGAGCCGCGCCGAGTATCGTCTCAGCCTGCGTGAAGACAATGCCGACATGCGCCTGACCGAAATCGGCC
GCGAACTGGGGCTCGTCGACGACACGCGCTGGGATGCATTCAGCCGGAAACGCGACGCTGTTTCACGTGAAACCGAACGC
CTGAAGTCGACGTGGGTCACGCCGAAGACGTTGCCGCCGGAAGAGGCGACCGCGCTCCTCGGCAAGGCGATCGATCACGA
ATACAGCCTCGCCGAGCTGCTGCGCCGTCCGGGTATCAGCTACGACGGTGTGTGCGGGCTGAAGGGCGGCGAATGCGGCC
CTGCAGAGCCGCTGGCCGACGATCCGGTGCTGCTCGAGCAGATCAAGGAGCAGGTCGAGATCGGCATCAAGTACCAGGGC
TATATCGAGCGTCAGGCCTCCGAGATCGAACGCAACGATGCGAACGAGAACACGCGCCTGCCGGACGGTATCGATTACCG
CGAAGTCCGCGGTCTGTCGTTCGAGGTGAGCCAGAAGCTCAACGAGTTCCGGCCGGAAACGATCGGGCAGGCATCGCGTA
TCTCGGGTGTCACGCCGGCCGCGATCTCGCTGCTGATGGTGCACCTGAAGCGCCGCGGCCTGGGCCGCCGTAATGGCACT
GCCGAAGCGGCAACGGAGCAGGGGGACGGCGCCGTCCCGACGCAACAATGA

Upstream 100 bases:

>100_bases
TACCATTCGGACGGCATTCGGGTGAAAAGCGAACCCGCTATAATTCGGCCCATACATTTCTCAGATAGGTTCGTGCGCAG
TCCTGCGGACGGAATCCACC

Downstream 100 bases:

>100_bases
CGGCGCGTCGCGCGCCGGCGGTTAATCGGGATGGTCTGGAACAGATGCTCGTCGAAGGCACGACGGCGCTCGACCTCGCA
TTGACGGATGCACAACACAA

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A [H]

Number of amino acids: Translated: 656; Mature: 656

Protein sequence:

>656_residues
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDESGIQ
FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLD
GKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDGRSIDFSQLTEQPGDLDPVPVFSFLGRAEQHPQQ
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD
VQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKD
AWCPRRDQAYLGVLVDDLVTRGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDTRWDAFSRKRDAVSRETER
LKSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLADDPVLLEQIKEQVEIGIKYQG
YIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGT
AEAATEQGDGAVPTQQ

Sequences:

>Translated_656_residues
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDESGIQ
FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLD
GKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDGRSIDFSQLTEQPGDLDPVPVFSFLGRAEQHPQQ
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD
VQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKD
AWCPRRDQAYLGVLVDDLVTRGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDTRWDAFSRKRDAVSRETER
LKSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLADDPVLLEQIKEQVEIGIKYQG
YIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGT
AEAATEQGDGAVPTQQ
>Mature_656_residues
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDESGIQ
FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLD
GKIHVGLNNYTGGRAGDPAAVSLSSRLKELKLPQGRLKTGTPPRIDGRSIDFSQLTEQPGDLDPVPVFSFLGRAEQHPQQ
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD
VQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLETKAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKD
AWCPRRDQAYLGVLVDDLVTRGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDTRWDAFSRKRDAVSRETER
LKSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLADDPVLLEQIKEQVEIGIKYQG
YIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKLNEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGT
AEAATEQGDGAVPTQQ

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family [H]

Homologues:

Organism=Homo sapiens, GI74024895, Length=653, Percent_Identity=44.2572741194487, Blast_Score=484, Evalue=1e-136,
Organism=Homo sapiens, GI19882217, Length=678, Percent_Identity=42.6253687315634, Blast_Score=469, Evalue=1e-132,
Organism=Homo sapiens, GI183227703, Length=688, Percent_Identity=42.1511627906977, Blast_Score=464, Evalue=1e-131,
Organism=Escherichia coli, GI2367273, Length=639, Percent_Identity=69.6400625978091, Blast_Score=910, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17534255, Length=635, Percent_Identity=41.7322834645669, Blast_Score=478, Evalue=1e-135,
Organism=Saccharomyces cerevisiae, GI6321202, Length=638, Percent_Identity=45.9247648902821, Blast_Score=510, Evalue=1e-145,
Organism=Drosophila melanogaster, GI24658174, Length=649, Percent_Identity=46.3790446841294, Blast_Score=503, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595 [H]

Pfam domain/function: PF01134 GIDA [H]

EC number: NA

Molecular weight: Translated: 71949; Mature: 71949

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLV
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH
KEVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL
HHHHHHCCHHEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE
FQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA
HHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEEECEEECCEEEEEECCCCCCCCCCCCE
VSLSSRLKELKLPQGRLKTGTPPRIDGRSIDFSQLTEQPGDLDPVPVFSFLGRAEQHPQQ
EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCHHHCCCCC
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP
CCEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC
EGLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLET
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHH
KAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVT
HHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHH
RGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDTRWDAFSRKRDAVSRETER
HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLAD
HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCC
DPVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKL
CHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH
NEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGTAEAATEQGDGAVPTQQ
HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLFPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQMSCNPSIGGIGKGHLV
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH
KEVDALGGAMAAATDESGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL
HHHHHHCCHHEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE
FQQAVDDLMVEGDRVVGAVTQIGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA
HHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEEECEEECCEEEEEECCCCCCCCCCCCE
VSLSSRLKELKLPQGRLKTGTPPRIDGRSIDFSQLTEQPGDLDPVPVFSFLGRAEQHPQQ
EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCHHHCCCCC
LPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP
CCEEEECCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC
EGLTTNEFYPNGISTSLPFDVQLELVHSMRGLENAHILRPGYAIEYDYFDPRALKASLET
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHHHHH
KAINGLFFAGQINGTTGYEEAAAQGLLAGLNAGRYVQEKDAWCPRRDQAYLGVLVDDLVT
HHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHH
RGVAEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGLVDDTRWDAFSRKRDAVSRETER
HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKSTWVTPKTLPPEEATALLGKAIDHEYSLAELLRRPGISYDGVCGLKGGECGPAEPLAD
HHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCC
DPVLLEQIKEQVEIGIKYQGYIERQASEIERNDANENTRLPDGIDYREVRGLSFEVSQKL
CHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH
NEFRPETIGQASRISGVTPAAISLLMVHLKRRGLGRRNGTAEAATEQGDGAVPTQQ
HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA