| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064714
Identifier: 78064714
GI number: 78064714
Start: 69299
End: 69988
Strand: Reverse
Name: 78064714
Synonym: Bcep18194_A3237
Alternate gene names: NA
Gene position: 69988-69299 (Counterclockwise)
Preceding gene: 78064715
Following gene: 78064713
Centisome position: 1.89
GC content: 70.14
Gene sequence:
>690_bases ATGAAACCAGCCGTCCGCTCTGACGCGCCGATGCGACGCCCGCTCGCCCGCCCCGCTCGCGGCTTCACGCTGATCGAGCT GATGATCGCGATCGCGATCCTCGCGGTGGTCGCGATCCTCGCGTGGCGCGGGCTCGACCAGATCATGCGCGGTCGCGACA AGGTCGCGGCCGCGATGGAAGACGAGCGCGTGTTCGCGCAGATGTTCGACCAGATGCGCATCGACGCGCGGCTCGCCGCG ACCGACGACGAGGCCGGCCAGCCGGCGATCGGCGTCGCCGGCAATACGTTGCAGATCGTCCGCGAACTCGAGGTGCCGGG CGTTGCGCCGCGGCTGCAGGTGGTGCGTTACCGGATCGCCGTCGGGCGCGTGGTGCGCTACGCATCGCCGCCGATCGACG ACGCGAACCGGCTGCGCAGCATGCTGAAGGACAGCAGCGTCGAAGGCTGGAGCTGGGTCGCGCTGATGGGGGGCGTCGGC GCGATCGACGCGAAGCTGTACGTGCCGCGCGTGGGCTGGACCACCAACCTGCAGACGGCCGACGAAGCGCTCGCACAGAA CAACGATGCACTCAAGGTGCCGCAGATCGGCAACGCGCCGCCCGCACGCGCGGTGACGGGCCTGCAGGTCAGCATCGGCG CAACGTCGCTGCGCGTGCCGGTCACGCGCATCTTCCTCGTCGGGGAATGA
Upstream 100 bases:
>100_bases GTGAGCACCACGCCCAACCCGGTGTTCCGGCGCGTGCGGATTTCGGTGAGCATGCCCGGGCATACCGGCGTGCTGGCGCA AATGGTGACGGTGGTCGCGA
Downstream 100 bases:
>100_bases CGATGCGCGCGCGCCCTCACCGCTCATTATTTGCCGCCCGTGCCGCCGGTCGCGCGCGGGCACGCGGCCGCCAGCGCGGC GCGGCGATCATCACGGCGCT
Product: putative general secretion pathway protein J
Products: NA
Alternate protein names: Type II Secretory Pathway Component PulJ; General Secretion Pathway Protein J; Type II Secretion System Protein J
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKPAVRSDAPMRRPLARPARGFTLIELMIAIAILAVVAILAWRGLDQIMRGRDKVAAAMEDERVFAQMFDQMRIDARLAA TDDEAGQPAIGVAGNTLQIVRELEVPGVAPRLQVVRYRIAVGRVVRYASPPIDDANRLRSMLKDSSVEGWSWVALMGGVG AIDAKLYVPRVGWTTNLQTADEALAQNNDALKVPQIGNAPPARAVTGLQVSIGATSLRVPVTRIFLVGE
Sequences:
>Translated_229_residues MKPAVRSDAPMRRPLARPARGFTLIELMIAIAILAVVAILAWRGLDQIMRGRDKVAAAMEDERVFAQMFDQMRIDARLAA TDDEAGQPAIGVAGNTLQIVRELEVPGVAPRLQVVRYRIAVGRVVRYASPPIDDANRLRSMLKDSSVEGWSWVALMGGVG AIDAKLYVPRVGWTTNLQTADEALAQNNDALKVPQIGNAPPARAVTGLQVSIGATSLRVPVTRIFLVGE >Mature_229_residues MKPAVRSDAPMRRPLARPARGFTLIELMIAIAILAVVAILAWRGLDQIMRGRDKVAAAMEDERVFAQMFDQMRIDARLAA TDDEAGQPAIGVAGNTLQIVRELEVPGVAPRLQVVRYRIAVGRVVRYASPPIDDANRLRSMLKDSSVEGWSWVALMGGVG AIDAKLYVPRVGWTTNLQTADEALAQNNDALKVPQIGNAPPARAVTGLQVSIGATSLRVPVTRIFLVGE
Specific function: Unknown
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24786; Mature: 24786
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAVRSDAPMRRPLARPARGFTLIELMIAIAILAVVAILAWRGLDQIMRGRDKVAAAME CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH DERVFAQMFDQMRIDARLAATDDEAGQPAIGVAGNTLQIVRELEVPGVAPRLQVVRYRIA HHHHHHHHHHHHHHHHEEEECCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHH VGRVVRYASPPIDDANRLRSMLKDSSVEGWSWVALMGGVGAIDAKLYVPRVGWTTNLQTA HHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCEEEECCCCCCCCCHHH DEALAQNNDALKVPQIGNAPPARAVTGLQVSIGATSLRVPVTRIFLVGE HHHHHCCCCCEECCCCCCCCCCHHCCCEEEEECCCEEECCEEEEEEECC >Mature Secondary Structure MKPAVRSDAPMRRPLARPARGFTLIELMIAIAILAVVAILAWRGLDQIMRGRDKVAAAME CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH DERVFAQMFDQMRIDARLAATDDEAGQPAIGVAGNTLQIVRELEVPGVAPRLQVVRYRIA HHHHHHHHHHHHHHHHEEEECCCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHH VGRVVRYASPPIDDANRLRSMLKDSSVEGWSWVALMGGVGAIDAKLYVPRVGWTTNLQTA HHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCEEEECCCCCCCCCHHH DEALAQNNDALKVPQIGNAPPARAVTGLQVSIGATSLRVPVTRIFLVGE HHHHHCCCCCEECCCCCCCCCCHHCCCEEEEECCCEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA