| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064713
Identifier: 78064713
GI number: 78064713
Start: 68169
End: 69296
Strand: Reverse
Name: 78064713
Synonym: Bcep18194_A3236
Alternate gene names: NA
Gene position: 69296-68169 (Counterclockwise)
Preceding gene: 78064714
Following gene: 78064712
Centisome position: 1.88
GC content: 69.24
Gene sequence:
>1128_bases ATGCGCGCGCGCCCTCACCGCTCATTATTTGCCGCCCGTGCCGCCGGTCGCGCGCGGGCACGCGGCCGCCAGCGCGGCGC GGCGATCATCACGGCGCTGCTGGTCGTCGCGCTGTCGGCGATCCTCGTGTCGGGGATGCTGTGGCGCCAGCAGGTGCAGA TCCGCCGCATCGAAAACCAGCGCGTGATCGCGCAGGCGCAGTGGGTCGCGCGCGGCGCGCTCGACTGGACGCGGATGATC CTGCGCTCCGAAGGCGATACGGCGCCCGGCATCACGTATCTCGGCGGGATCTGGGGCGTGCCGATCGCGAAGACGAAACT GTCGGACTTCCTCGGCCGGATCGGCGCGCCCAACGACACCGGCGGCGAAGACACCTATATCTCCGGCTCGATCGAAGACG CACAGGCGAAGTTCAACCTGCGCAACCTCGTGGCGTCGCCGGCGCCCGGCGTGCTGCAGTTGAACGTCACGCAGGTCCAG GCGTTCCAGCGCCTGCTGACGACGCTCGGTTACGACGGCGCGTTCGCGAAGCGCATCGCGCTGCAGGTGCGCGCGAGCCT GCTGAATTCGGCGACGCGTTTCCAGATGCCGACGCTGCCGGGTGGCGGCACGGCGCCGCCGATCACTGCGCCGGTGACGA CCGATCAGCAAGGCGGCGGCCTCACCGACGATCCCGGCATGACGGGCGGCGACCGCGGGCCGGCGCCGCTGATGATGACG GGCGTCGACAGCCTGCTCGACGTCGACGGCGTGACGCCCGAGATGGTCGCGCGGTTGCGCCCGTTCGTCACCGTGCTGCC GACCACGACACCCGTGAACATGAACACGGCGCCGGCCGAGGTGATCGCGGCGCTGATGCCGGGAATGAGCGTGTCGTCTG CGCAGGCGCTCGTGTCGCGCCGCGAGACCGTGTTTTTCCGCAACGTCGGCGACGTGCAGCTCGCGCTGCGCGGCGCCGGT GCGCCGAACGTGACGCTCGACTCGAGCGTCATCGACGTCAATTCGAGCTATTTCATCGTGCATGGCCGGATCCAGCACGA CCGCGCGGAGGTCGATCGCACTTCGCTCGTGTATCGTGATCCGACCACGCATTCGACACGGGTCGTGCGCATTCGCGACC AGCTATAA
Upstream 100 bases:
>100_bases ACGCGCCGCCCGCACGCGCGGTGACGGGCCTGCAGGTCAGCATCGGCGCAACGTCGCTGCGCGTGCCGGTCACGCGCATC TTCCTCGTCGGGGAATGACG
Downstream 100 bases:
>100_bases CGACGCCAATCGGGAGAGGAGCTCTTGTGAGCACGTTGATTGTTTCTTTGCCGCCGCGCGAGCCTGCCGTGCCGTTGCAG GAATGGCAGTGGCCCGAGCT
Product: general secretion pathway protein K
Products: NA
Alternate protein names: Type II Secretion System; Type II Secretory Pathway Component PulK; General Secretion Pathway Protein K/X; General Secretory Pathway Protein K; General Secretory Pathway K Transmembrane Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRARPHRSLFAARAAGRARARGRQRGAAIITALLVVALSAILVSGMLWRQQVQIRRIENQRVIAQAQWVARGALDWTRMI LRSEGDTAPGITYLGGIWGVPIAKTKLSDFLGRIGAPNDTGGEDTYISGSIEDAQAKFNLRNLVASPAPGVLQLNVTQVQ AFQRLLTTLGYDGAFAKRIALQVRASLLNSATRFQMPTLPGGGTAPPITAPVTTDQQGGGLTDDPGMTGGDRGPAPLMMT GVDSLLDVDGVTPEMVARLRPFVTVLPTTTPVNMNTAPAEVIAALMPGMSVSSAQALVSRRETVFFRNVGDVQLALRGAG APNVTLDSSVIDVNSSYFIVHGRIQHDRAEVDRTSLVYRDPTTHSTRVVRIRDQL
Sequences:
>Translated_375_residues MRARPHRSLFAARAAGRARARGRQRGAAIITALLVVALSAILVSGMLWRQQVQIRRIENQRVIAQAQWVARGALDWTRMI LRSEGDTAPGITYLGGIWGVPIAKTKLSDFLGRIGAPNDTGGEDTYISGSIEDAQAKFNLRNLVASPAPGVLQLNVTQVQ AFQRLLTTLGYDGAFAKRIALQVRASLLNSATRFQMPTLPGGGTAPPITAPVTTDQQGGGLTDDPGMTGGDRGPAPLMMT GVDSLLDVDGVTPEMVARLRPFVTVLPTTTPVNMNTAPAEVIAALMPGMSVSSAQALVSRRETVFFRNVGDVQLALRGAG APNVTLDSSVIDVNSSYFIVHGRIQHDRAEVDRTSLVYRDPTTHSTRVVRIRDQL >Mature_375_residues MRARPHRSLFAARAAGRARARGRQRGAAIITALLVVALSAILVSGMLWRQQVQIRRIENQRVIAQAQWVARGALDWTRMI LRSEGDTAPGITYLGGIWGVPIAKTKLSDFLGRIGAPNDTGGEDTYISGSIEDAQAKFNLRNLVASPAPGVLQLNVTQVQ AFQRLLTTLGYDGAFAKRIALQVRASLLNSATRFQMPTLPGGGTAPPITAPVTTDQQGGGLTDDPGMTGGDRGPAPLMMT GVDSLLDVDGVTPEMVARLRPFVTVLPTTTPVNMNTAPAEVIAALMPGMSVSSAQALVSRRETVFFRNVGDVQLALRGAG APNVTLDSSVIDVNSSYFIVHGRIQHDRAEVDRTSLVYRDPTTHSTRVVRIRDQL
Specific function: Unknown
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40193; Mature: 40193
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARPHRSLFAARAAGRARARGRQRGAAIITALLVVALSAILVSGMLWRQQVQIRRIENQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVIAQAQWVARGALDWTRMILRSEGDTAPGITYLGGIWGVPIAKTKLSDFLGRIGAPNDT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC GGEDTYISGSIEDAQAKFNLRNLVASPAPGVLQLNVTQVQAFQRLLTTLGYDGAFAKRIA CCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHH LQVRASLLNSATRFQMPTLPGGGTAPPITAPVTTDQQGGGLTDDPGMTGGDRGPAPLMMT HHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC GVDSLLDVDGVTPEMVARLRPFVTVLPTTTPVNMNTAPAEVIAALMPGMSVSSAQALVSR CCHHHHHCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH RETVFFRNVGDVQLALRGAGAPNVTLDSSVIDVNSSYFIVHGRIQHDRAEVDRTSLVYRD HHEEEEECCCCEEEEEECCCCCCCEECCEEEEECCCEEEEEEEECCCHHHCCHHEEEEEC PTTHSTRVVRIRDQL CCCCCEEEEEEECCC >Mature Secondary Structure MRARPHRSLFAARAAGRARARGRQRGAAIITALLVVALSAILVSGMLWRQQVQIRRIENQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVIAQAQWVARGALDWTRMILRSEGDTAPGITYLGGIWGVPIAKTKLSDFLGRIGAPNDT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC GGEDTYISGSIEDAQAKFNLRNLVASPAPGVLQLNVTQVQAFQRLLTTLGYDGAFAKRIA CCCCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHH LQVRASLLNSATRFQMPTLPGGGTAPPITAPVTTDQQGGGLTDDPGMTGGDRGPAPLMMT HHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC GVDSLLDVDGVTPEMVARLRPFVTVLPTTTPVNMNTAPAEVIAALMPGMSVSSAQALVSR CCHHHHHCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH RETVFFRNVGDVQLALRGAGAPNVTLDSSVIDVNSSYFIVHGRIQHDRAEVDRTSLVYRD HHEEEEECCCCEEEEEECCCCCCCEECCEEEEECCCEEEEEEEECCCHHHCCHHEEEEEC PTTHSTRVVRIRDQL CCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA