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The map label for this gene is secY

Identifier: 161702972

GI number: 161702972

Start: 331564

End: 332913

Strand: Direct

Name: secY

Synonym: Bcep18194_A3467

Alternate gene names: 161702972

Gene position: 331564-332913 (Clockwise)

Preceding gene: 78064943

Following gene: 78064945

Centisome position: 8.98

GC content: 58.67

Gene sequence:

>1350_bases
TTGGCTAACAGCCCGAGTCTTGCAAAACCCGGTCGAAGCACGGCGAAATTCGGCGATCTGCGCCGGCGAGCAATGTTCTT
GCTCCTGGCGCTGATCGTCTATCGCATCGGCGCGCACATTCCCGTGCCGGGCATCGATCCGGATCAACTGGCAAAGCTGT
TCCAGAGCCAGGCGGGCGGCATCCTGGGCATGTTCAACATGTTCTCGGGTGGCGCGCTTTCCCGCTTCACGATCTTTGCG
CTGGGGATCATGCCGTACATCTCGGCGTCGATCATCATGCAGTTGCTGGCGATCGTATCGCCGCAGCTCGAGGCGCTGAA
GAAGGAAGGGCAGGCAGGGCAACGGAAGATCACGCAGTACACGCGGTATTTCACCGTGGTGCTCGCGACCTTCCAGGCGT
TCGGTATCGCGGCTGCGCTGGAAAACCAGCCGGGCCTCGTCACTGACCCCGGCATGCTGTTCCGTCTGACGACGGTCGTG
ACGCTGGTTACGGGCACGATGTTCCTGATGTGGCTCGGCGAGCAAATTACCGAGCGTGGTCTGGGCAACGGTATCTCGAT
CATCATCTTCGGCGGGATCGCAGCAGGGTTCCCGAATGCCGTCGGTGGGTTGTTCGAGCTGGTGCGTACGGGTTCGATGA
GCATCATTTCGGCGATCATCATCGTCGTTCTGATTGCCGCGGTGACTTACCTGGTCGTGTTCATCGAACGCGGTCAGCGC
AAGATCCTCGTGAACTACGCGAAGCGCCAGGTCGGCAACAAGATCTACGGTGGGCAGTCGTCGCATCTGCCGCTGAAGCT
GAACATGTCGGGTGTGATTCCGCCGATCTTCGCATCGTCGATCATTCTGTTCCCGGCAACGATTCTCGGCTGGTTCAGTA
CCGGTCAGCCGACGGGAAGCTGGATTTCCAATACGTTGCATAACGTTGCGGAAGCGCTGAAGCCGGGCCAGCCGGTCTAT
GTGCTGCTGTACACGCTGGCGATCGTGTTTTTCTGCTTCTTCTACACCGCACTGGTGTTCAACAGCAGGGAAACCGCGGA
CAACCTGAAGAAGAGCGGCGCGTTTGTTCCGGGCATCCGTCCGGGCGATCAGACCGCACGATATATCGACCGCATCCTCA
CGCGTCTGACGCTGGCCGGTGCGATCTACATCGTCTTCGTGTGTCTGCTGCCGGAGTTTCTGGTGCTGCGCTGGAACGTG
CCGTTTTATTTTGGTGGAACGTCGCTGCTGATCATTGTCGTCGTCACGATGGACTTTATGGCGCAGGTGCAGTCGTACGT
TATGTCGCAACAGTATGAGTCACTGCTCAAGAAGGCGAACTTCAAGGGCGGCAACATCCCGATGCGTTAA

Upstream 100 bases:

>100_bases
TGCCACCAAGGGTGCGCGCGCTGCGATCGAAGCGGCTGGCGGTTCGTTCGCCGAGTGACACGCGTAGCGCGTCGTCACTT
GCATTCATCGGAGAAGGTAC

Downstream 100 bases:

>100_bases
GGACTATGGCCAAAGACGATGTAATCCAGATGCAGGGTGAGGTGATCGAAAACCTCCCGAATGCGACCTTCCGTGTGAAG
CTGGAAAACGGCCATGTCGT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGGILGMFNMFSGGALSRFTIFA
LGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRYFTVVLATFQAFGIAAALENQPGLVTDPGMLFRLTTVV
TLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAVGGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPTGSWISNTLHNVAEALKPGQPVY
VLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNV
PFYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGNIPMR

Sequences:

>Translated_449_residues
MANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGGILGMFNMFSGGALSRFTIFA
LGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRYFTVVLATFQAFGIAAALENQPGLVTDPGMLFRLTTVV
TLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAVGGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPTGSWISNTLHNVAEALKPGQPVY
VLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNV
PFYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGNIPMR
>Mature_448_residues
ANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGGILGMFNMFSGGALSRFTIFAL
GIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRYFTVVLATFQAFGIAAALENQPGLVTDPGMLFRLTTVVT
LVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAVGGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQRK
ILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPTGSWISNTLHNVAEALKPGQPVYV
LLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVP
FYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGNIPMR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=450, Percent_Identity=65.3333333333333, Blast_Score=529, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48997; Mature: 48866

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
ILGMFNMFSGGALSRFTIFALGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQY
CEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHH
TRYFTVVLATFQAFGIAAALENQPGLVTDPGMLFRLTTVVTLVTGTMFLMWLGEQITERG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGNGISIIIFGGIAAGFPNAVGGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
CCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPTGS
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
WISNTLHNVAEALKPGQPVYVLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
PGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
AQVQSYVMSQQYESLLKKANFKGGNIPMR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
ILGMFNMFSGGALSRFTIFALGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQY
CEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHH
TRYFTVVLATFQAFGIAAALENQPGLVTDPGMLFRLTTVVTLVTGTMFLMWLGEQITERG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGNGISIIIFGGIAAGFPNAVGGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
CCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPTGS
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
WISNTLHNVAEALKPGQPVYVLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
PGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
AQVQSYVMSQQYESLLKKANFKGGNIPMR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]