Click here to switch to the map view.

The map label for this gene is yigF [H]

Identifier: 78050025

GI number: 78050025

Start: 5154272

End: 5154661

Strand: Reverse

Name: yigF [H]

Synonym: XCV4469

Alternate gene names: 78050025

Gene position: 5154661-5154272 (Counterclockwise)

Preceding gene: 78050026

Following gene: 78050024

Centisome position: 99.54

GC content: 61.28

Gene sequence:

>390_bases
ATGGATACCTTCGATCGCACCCAGCTCAGCCCCAAGTGGCAATTCCGCGTCGCCTTCTTCGACCGTCACGGCGGTCCCAG
GGACCCTGCCTACAAAGAGGCGCTCAAGACCCTGCCGTTCGGGGAGAAGCTCAAGGTGGGCATGAACTTCTACGCGTTGT
TCTTCGGCTTCATCTATTTCTTCATCCTGGGCCTGTGGCGCAAGGCGCTGGGCCTGATCGGCGTCGGCCTGGTGGTCGGC
ATCGTAGCCTCGTTCCTGCCCGCATCGATCGGTAACGCGCTGAGCATTCCACTGGCCCTGCTGGCCGGCATGAGCGCCAA
CTACGCCTACTACCTGGACAAGGTGAAGGGCAGCACCAGCTTCAACCCGTTCGAAGGCATGCGCTGGTAA

Upstream 100 bases:

>100_bases
CCTGAAAGCTGCACCGGACCCAGGTGACCGGCTGCGGGAACGCGTGCCGATGAATACGCGATCGCCTATCATGTAAACGT
TTACAACTACATGGATTGGA

Downstream 100 bases:

>100_bases
GCCACCGCCGGGCGCGGACCCTCCCACCGACGCCCTGCCGCCAAGCCCGGTCCTGTGACCGGGCTTTTTTGTGGGCCAAG
CGCGCCGGCCTAAGGACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDTFDRTQLSPKWQFRVAFFDRHGGPRDPAYKEALKTLPFGEKLKVGMNFYALFFGFIYFFILGLWRKALGLIGVGLVVG
IVASFLPASIGNALSIPLALLAGMSANYAYYLDKVKGSTSFNPFEGMRW

Sequences:

>Translated_129_residues
MDTFDRTQLSPKWQFRVAFFDRHGGPRDPAYKEALKTLPFGEKLKVGMNFYALFFGFIYFFILGLWRKALGLIGVGLVVG
IVASFLPASIGNALSIPLALLAGMSANYAYYLDKVKGSTSFNPFEGMRW
>Mature_129_residues
MDTFDRTQLSPKWQFRVAFFDRHGGPRDPAYKEALKTLPFGEKLKVGMNFYALFFGFIYFFILGLWRKALGLIGVGLVVG
IVASFLPASIGNALSIPLALLAGMSANYAYYLDKVKGSTSFNPFEGMRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790250, Length=120, Percent_Identity=39.1666666666667, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14445; Mature: 14445

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFDRTQLSPKWQFRVAFFDRHGGPRDPAYKEALKTLPFGEKLKVGMNFYALFFGFIYF
CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FILGLWRKALGLIGVGLVVGIVASFLPASIGNALSIPLALLAGMSANYAYYLDKVKGSTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC
FNPFEGMRW
CCCCCCCCC
>Mature Secondary Structure
MDTFDRTQLSPKWQFRVAFFDRHGGPRDPAYKEALKTLPFGEKLKVGMNFYALFFGFIYF
CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FILGLWRKALGLIGVGLVVGIVASFLPASIGNALSIPLALLAGMSANYAYYLDKVKGSTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC
FNPFEGMRW
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]