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The map label for this gene is ychJ [C]

Identifier: 78049953

GI number: 78049953

Start: 5069161

End: 5069547

Strand: Reverse

Name: ychJ [C]

Synonym: XCV4397

Alternate gene names: 78049953

Gene position: 5069547-5069161 (Counterclockwise)

Preceding gene: 78049955

Following gene: 78049952

Centisome position: 97.9

GC content: 71.83

Gene sequence:

>387_bases
ATGCCGACCGCACCCACCGACCCCTGTCCCTGCGGCCGCCCGGCCGATTACGCACGTTGTTGCGGCCCGTATCACGCCGG
TGCCGCCGCGCCCGACGCCGAGACGTTGATGCGCGCCCGCTACAGCGCCTACGTGCGCCGCGATGCTGCGTACCTGCTGG
CCAGCTGGCATCCGTCCACGCGCCCGGCCGCGCTGTCGCTGGACGAAGGCGGGCGCACCACCTGGCTTGGCCTGAGCGTG
CAGCGCACCCTCGAGACCGGCCCCGAGACGGCCGAGGTGGTCTTCCTGGCGCGCTATCGCATCGGTGGCGGCAGCGCAGT
CCGCATGACCGAACACAGCCGTTTCGTGCGCGAGGCAGGTCACTGGTACTACCTCGACGCGCGCTGA

Upstream 100 bases:

>100_bases
CACGCTCCGCGCAACGGGGGGCGACAGCATAGCCGCCGCTCCCGCGTCCCGCTTCGCAATGCAATCCCCAATCCCCAATC
CCATCCCGCACAATCCCCGC

Downstream 100 bases:

>100_bases
GTCCCACGCCGACCGTCCCACTCCAACCCGACGTCGCCAGCCAACTGCGCCCTCGATGCACCGCCCGCCAGGCCTGTTCA
GCCCGACGAACGGTCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPTAPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPSTRPAALSLDEGGRTTWLGLSV
QRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAGHWYYLDAR

Sequences:

>Translated_128_residues
MPTAPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPSTRPAALSLDEGGRTTWLGLSV
QRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAGHWYYLDAR
>Mature_127_residues
PTAPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPSTRPAALSLDEGGRTTWLGLSVQ
RTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAGHWYYLDAR

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=124, Percent_Identity=45.1612903225806, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 14077; Mature: 13946

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPST
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCC
RPAALSLDEGGRTTWLGLSVQRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAG
CCEEEEECCCCCEEEEEEEEEEHHHCCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHHCC
HWYYLDAR
CEEEEECC
>Mature Secondary Structure 
PTAPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPST
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCC
RPAALSLDEGGRTTWLGLSVQRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAG
CCEEEEECCCCCEEEEEEEEEEHHHCCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHHCC
HWYYLDAR
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA