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The map label for this gene is hel [H]

Identifier: 78049935

GI number: 78049935

Start: 5041516

End: 5042808

Strand: Reverse

Name: hel [H]

Synonym: XCV4379

Alternate gene names: 78049935

Gene position: 5042808-5041516 (Counterclockwise)

Preceding gene: 78049937

Following gene: 78049934

Centisome position: 97.38

GC content: 66.9

Gene sequence:

>1293_bases
ATGGATGACTCCGGGAGGCGATCAGCGCACAAGGATATGCCGATCCGCTGCCGGCGTTCTTCCGCTGCGACGCTATGCAA
GGCGGCCGACGCCATCGACGGTGTCGCGCATGTCAGCGTCGTGCGCCGGCAACGGGCGTGGGCATCCAGGAACGGGCACG
GCACATATTCGCCATCGTGTGGAAGACCGATGCAGCCACGCGGTTGGACGACCGGTATTGCGGCGACCGTCGTCCGTGCG
CCCCTGTCATTTCGATGGCGGCGCCATCGGCCAGCGCGAGCGGTACGGCGCGAACCGGCTAAAATCGCACGCTTTATTGT
CGACCCTGTCCCGGTGGATGCCATGCGCCCCTCGCTTTACGCTCCGTTGTCCTTCATCGCCTGCACCGCGCTGGCCCTGG
GCGCCTGCAAGCCCGCCGACACGCAGCCAGCCCCGCACGCGCAGGAAGCCACCGCAACTGCCGATGCCGACGCCAGCGCT
GCGGCCAGCAAGGCCGCAACGTCGTCCACCACTGCACCGGCCGGCGACGACAACCTCAATGCGGTGCTGTGGATGCAGCG
CTCGGAGGAATACCGTGCCGTGGCCGAGCAGACCTATCGCGCTGCGGCCGACAAACTGGACGCTGCACTCAAGCAATCCA
ACTGGGACGCGTTGGTGCCGGAGGAACGCGGCAATGCCGCCACCGGCCTGAAGCCGGCGGTGGTGCTGGATGTGGACGAG
ACTGTGCTTGACAACTCGCCCTACCAGGCGCGGCTGCTGCGCGATGGCAAGGAATACGACGAGCTGAGCTGGGACCAGTG
GGTGGCCGAGAAGAAGGCCACTGCCATTCCCGGCGTGGTGGATTTCGCCAAGGCCGCCAATGCCCGCGGCATCACCCTGA
TCTACATTTCCAACCGCGCGGTGCACCTGAAGGACGCCACCTTGGCCAATCTGCGCAGCGTGGGCCTGCCGGTGGCCGAT
GACAGCGTCTTTCTCGGCCTGGGCACGGTGGTGCCCGGCTGCGAGCAGAACGGCAGCGAAAAGAACTGCCGCCGCCAGCT
GGCCGGACAGAAGTACCGCGTGCTGATGCAGTTCGGCGACCAGCTGGGCGACTTCGTGCAGGTCACCGCCAACACCGGCC
AGGCGCGTGGCGCCTTGCTGCAGCAGTACCACGACTGGTTCGGCGAACGCTGGTGGATGCTGCCCAACCCCAGCTACGGC
GGCTGGGAGCCGGCGCAGTTCAACAACGACTACGCGCAACCCTGGCAAAAGCGCCACGACGCCAAGCGCGCTGCGCTGGA
GGTGGCCCGATGA

Upstream 100 bases:

>100_bases
GAGCGGGTACGCGTCCGGCGTGGTGGCCTCCTTTTCGATCAGGCATCCCAGCACGCGGGCCTGGGCGGTATCGAGGACGG
GCGGGGGCGAGGTCTCTGTC

Downstream 100 bases:

>100_bases
GCCGCGCGCCCTTGCCGCTGGCCGCGCATGAGCGGCTGATCTTCGCGCTGGATGTGCCCGGCCACGATGAAGCGATCGCC
TGGGTGGACCGGCTCGGCGA

Product: putative acid phosphatase

Products: NA

Alternate protein names: Outer membrane protein P4; OMP P4 [H]

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDDSGRRSAHKDMPIRCRRSSAATLCKAADAIDGVAHVSVVRRQRAWASRNGHGTYSPSCGRPMQPRGWTTGIAATVVRA
PLSFRWRRHRPARAVRREPAKIARFIVDPVPVDAMRPSLYAPLSFIACTALALGACKPADTQPAPHAQEATATADADASA
AASKAATSSTTAPAGDDNLNAVLWMQRSEEYRAVAEQTYRAAADKLDAALKQSNWDALVPEERGNAATGLKPAVVLDVDE
TVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAANARGITLIYISNRAVHLKDATLANLRSVGLPVAD
DSVFLGLGTVVPGCEQNGSEKNCRRQLAGQKYRVLMQFGDQLGDFVQVTANTGQARGALLQQYHDWFGERWWMLPNPSYG
GWEPAQFNNDYAQPWQKRHDAKRAALEVAR

Sequences:

>Translated_430_residues
MDDSGRRSAHKDMPIRCRRSSAATLCKAADAIDGVAHVSVVRRQRAWASRNGHGTYSPSCGRPMQPRGWTTGIAATVVRA
PLSFRWRRHRPARAVRREPAKIARFIVDPVPVDAMRPSLYAPLSFIACTALALGACKPADTQPAPHAQEATATADADASA
AASKAATSSTTAPAGDDNLNAVLWMQRSEEYRAVAEQTYRAAADKLDAALKQSNWDALVPEERGNAATGLKPAVVLDVDE
TVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAANARGITLIYISNRAVHLKDATLANLRSVGLPVAD
DSVFLGLGTVVPGCEQNGSEKNCRRQLAGQKYRVLMQFGDQLGDFVQVTANTGQARGALLQQYHDWFGERWWMLPNPSYG
GWEPAQFNNDYAQPWQKRHDAKRAALEVAR
>Mature_430_residues
MDDSGRRSAHKDMPIRCRRSSAATLCKAADAIDGVAHVSVVRRQRAWASRNGHGTYSPSCGRPMQPRGWTTGIAATVVRA
PLSFRWRRHRPARAVRREPAKIARFIVDPVPVDAMRPSLYAPLSFIACTALALGACKPADTQPAPHAQEATATADADASA
AASKAATSSTTAPAGDDNLNAVLWMQRSEEYRAVAEQTYRAAADKLDAALKQSNWDALVPEERGNAATGLKPAVVLDVDE
TVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAANARGITLIYISNRAVHLKDATLANLRSVGLPVAD
DSVFLGLGTVVPGCEQNGSEKNCRRQLAGQKYRVLMQFGDQLGDFVQVTANTGQARGALLQQYHDWFGERWWMLPNPSYG
GWEPAQFNNDYAQPWQKRHDAKRAALEVAR

Specific function: Unknown

COG id: COG2503

COG function: function code R; Predicted secreted acid phosphatase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005519
- InterPro:   IPR023214
- InterPro:   IPR006423 [H]

Pfam domain/function: PF03767 Acid_phosphat_B [H]

EC number: NA

Molecular weight: Translated: 46986; Mature: 46986

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDSGRRSAHKDMPIRCRRSSAATLCKAADAIDGVAHVSVVRRQRAWASRNGHGTYSPSC
CCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GRPMQPRGWTTGIAATVVRAPLSFRWRRHRPARAVRREPAKIARFIVDPVPVDAMRPSLY
CCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCHHHHCCCHH
APLSFIACTALALGACKPADTQPAPHAQEATATADADASAAASKAATSSTTAPAGDDNLN
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
AVLWMQRSEEYRAVAEQTYRAAADKLDAALKQSNWDALVPEERGNAATGLKPAVVLDVDE
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCH
TVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAANARGITLIYISNRA
HHHCCCCCHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCE
VHLKDATLANLRSVGLPVADDSVFLGLGTVVPGCEQNGSEKNCRRQLAGQKYRVLMQFGD
EEECCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
QLGDFVQVTANTGQARGALLQQYHDWFGERWWMLPNPSYGGWEPAQFNNDYAQPWQKRHD
HHCCEEEEECCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
AKRAALEVAR
HHHHHHHHCC
>Mature Secondary Structure
MDDSGRRSAHKDMPIRCRRSSAATLCKAADAIDGVAHVSVVRRQRAWASRNGHGTYSPSC
CCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GRPMQPRGWTTGIAATVVRAPLSFRWRRHRPARAVRREPAKIARFIVDPVPVDAMRPSLY
CCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCHHHHCCCHH
APLSFIACTALALGACKPADTQPAPHAQEATATADADASAAASKAATSSTTAPAGDDNLN
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
AVLWMQRSEEYRAVAEQTYRAAADKLDAALKQSNWDALVPEERGNAATGLKPAVVLDVDE
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCH
TVLDNSPYQARLLRDGKEYDELSWDQWVAEKKATAIPGVVDFAKAANARGITLIYISNRA
HHHCCCCCHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCE
VHLKDATLANLRSVGLPVADDSVFLGLGTVVPGCEQNGSEKNCRRQLAGQKYRVLMQFGD
EEECCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
QLGDFVQVTANTGQARGALLQQYHDWFGERWWMLPNPSYGGWEPAQFNNDYAQPWQKRHD
HHCCEEEEECCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
AKRAALEVAR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1715322; 7542800 [H]