| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049908
Identifier: 78049908
GI number: 78049908
Start: 5004677
End: 5005123
Strand: Reverse
Name: 78049908
Synonym: XCV4352
Alternate gene names: NA
Gene position: 5005123-5004677 (Counterclockwise)
Preceding gene: 78049909
Following gene: 78049907
Centisome position: 96.65
GC content: 68.23
Gene sequence:
>447_bases ATGAACGAAGCTTGCGTTTCCCGGTTGCTGCGCACCCTGGCGTGCGTTGTCGTAGCGGCGCTGCCGCTGATGCCTGCGCT GGCGGCAGCGTCCTCGCCGGTACAGGGCCTGTGGCTGACTGCGGCCAAGGACGCCGTCATCGCATTTGCGCCGTGTACCG ATGCCGCCAGCGCGATGTGCGGAAAGGTGGTGTGGGACAAGGACGCCGGCACGCCGAAGGACACCTGCGGTGTGCAGATC GCGCGCCTGGAGCGCGACGACAACGGCACCTGGCGCGAGGGTTGGGCATTCGATCCGCGCAGCGGCAAGCGCTACAAGGC CACGCTGCGGAGCAAGGGCGACAGCCTGACCCTGCGCGCGTTCATCGGCGCCGAAGTGCTCGGCGAAAACATGCTGTTCA CCCGCGTGCAGGCCCTGCCATCCACGCCGGTGTGCGCCAGCCACTAG
Upstream 100 bases:
>100_bases TCCAGGCAATCGCCACGCTTGAGCCTGTTGCAAAAAGGTAATCATCGCTATACGGTAGTTTTCACTACTGTCATGAGCGG GTGCCCGCGGGGTTGCGGCA
Downstream 100 bases:
>100_bases CTGCGGCCAGCGCCACATGCGCGCGCAGCACCGGCCGCCGCGATCGCGGCGGTTCTCACTCACATCCACCGGGGGAATCC AGATGGCGAAGATCCATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTDAASAMCGKVVWDKDAGTPKDTCGVQI ARLERDDNGTWREGWAFDPRSGKRYKATLRSKGDSLTLRAFIGAEVLGENMLFTRVQALPSTPVCASH
Sequences:
>Translated_148_residues MNEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTDAASAMCGKVVWDKDAGTPKDTCGVQI ARLERDDNGTWREGWAFDPRSGKRYKATLRSKGDSLTLRAFIGAEVLGENMLFTRVQALPSTPVCASH >Mature_148_residues MNEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTDAASAMCGKVVWDKDAGTPKDTCGVQI ARLERDDNGTWREGWAFDPRSGKRYKATLRSKGDSLTLRAFIGAEVLGENMLFTRVQALPSTPVCASH
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15737; Mature: 15737
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTDAASAMC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCHHHHHHH GKVVWDKDAGTPKDTCGVQIARLERDDNGTWREGWAFDPRSGKRYKATLRSKGDSLTLRA CCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEHH FIGAEVLGENMLFTRVQALPSTPVCASH HHHHHHHCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTDAASAMC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCHHHHHHH GKVVWDKDAGTPKDTCGVQIARLERDDNGTWREGWAFDPRSGKRYKATLRSKGDSLTLRA CCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEHH FIGAEVLGENMLFTRVQALPSTPVCASH HHHHHHHCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA