Click here to switch to the map view.

The map label for this gene is 78049787

Identifier: 78049787

GI number: 78049787

Start: 4859397

End: 4859939

Strand: Reverse

Name: 78049787

Synonym: XCV4231

Alternate gene names: NA

Gene position: 4859939-4859397 (Counterclockwise)

Preceding gene: 78049788

Following gene: 78049786

Centisome position: 93.85

GC content: 67.59

Gene sequence:

>543_bases
GTGCGAAGCCAACCCGACACCGGTCGTCCCGAGGATCTAAATCTGGCGCTGGTCAAGGTGATCTGGGATCTGACCGGCGG
ATGCTTCCTGGCGATTGGTCTGGGGCCGTTGATCGGCAATGCCGACAGGCTCGGCCCTGGCGTCTACCGGTTGCTCGTGG
GCTATCCCAGCGTCATGCGCGCGATCAATGGGTTGGTCGCCACGGTCGGCAACAACCGGACCGCGTCGGCCGGCGCGCTG
CTGACGGTATTGGTGGCCGTGTACGAGGCCGGCGTGTTCATGCCGTTGCTGCGGCTGGTGCTGAGCATGGCCGGGTGGTG
GGCCCTGTCGATGGCGCTGGTCACCATCCTCACCAAGGTGCTGGGCGGTGCGGCGAGCGCCGGTGCGACGGTGGCGGCAG
AGCTGATCACCAGTTTCGCGATCTGGGCTTACCAGACGACGATGGACGTGCTGGCCTACGTGGCCTCGACCAGCGCCGGG
GCGGCCTTCCTGATTGCACAGGACGACGGGAGCGCCGCGCCGTCGCCGCTGCTGGAGGCCTGA

Upstream 100 bases:

>100_bases
CTCGGCCGGGCAGAACTGATCACGAACGTTCAGCACTCCGTCCGGGCACGATCGGGGTGCTTTCCGGTGATGTCACCCGA
ACGAACGGGCGCAGGTTCAC

Downstream 100 bases:

>100_bases
TTCGCATCCAGGCACCCGCCACGTCATTGCGGCGCGGCGGGTGTTGGACCTGCGCTGATGGGGTGTGGCGATGTTTGTCG
AGCAGCTGCAGGCAGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRSQPDTGRPEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLVGYPSVMRAINGLVATVGNNRTASAGAL
LTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVASTSAG
AAFLIAQDDGSAAPSPLLEA

Sequences:

>Translated_180_residues
MRSQPDTGRPEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLVGYPSVMRAINGLVATVGNNRTASAGAL
LTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVASTSAG
AAFLIAQDDGSAAPSPLLEA
>Mature_180_residues
MRSQPDTGRPEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLVGYPSVMRAINGLVATVGNNRTASAGAL
LTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVASTSAG
AAFLIAQDDGSAAPSPLLEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18495; Mature: 18495

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00381 CLP_PROTEASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSQPDTGRPEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLVGYPSVMR
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCHHHHHHHHCCHHHHH
AINGLVATVGNNRTASAGALLTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGAASAGATVAAELITSFAIWAYQTTMDVLAYVASTSAGAAFLIAQDDGSAAPSPLLEA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRSQPDTGRPEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLVGYPSVMR
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCHHHHHHHHCCHHHHH
AINGLVATVGNNRTASAGALLTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGAASAGATVAAELITSFAIWAYQTTMDVLAYVASTSAGAAFLIAQDDGSAAPSPLLEA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA