| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is zwf2 [H]
Identifier: 78049724
GI number: 78049724
Start: 4776771
End: 4778600
Strand: Reverse
Name: zwf2 [H]
Synonym: XCV4168
Alternate gene names: 78049724
Gene position: 4778600-4776771 (Counterclockwise)
Preceding gene: 78049725
Following gene: 78049723
Centisome position: 92.28
GC content: 63.66
Gene sequence:
>1830_bases ATGAGTGAGCAAGCAACCACACCGCCGTGCATCATCGTGGTGTTCGGCGCACGCGGCGATCTGACCAAGCGCCTGGTCAT GCCGGCGCTGTACAACCTGCGCCGTTCCGGTGCGCTGGGCGATGAGTTCGCCATTGTCGGCATGGACCATGGCGACATCA GCGAACGCGCGTGGCGGACCAACATGGGGCAGTCGATGACGCAGCTGCTCAGCAGTCGCGATGCCGAATTCCAGACCGAC GAATTCGACACCGCCACCTGGGACTGGTTGCGCGAGCGCATGCATTACCTGCGCGGCGACTTCACCGATCAGGGAGCCTA CCGATCGCTGGGCGGCGTGCTGGACAAGCTGCACAAGCGCTATGGCACGCAGGGCAACGTGCTGTTCTATCTGGCCACCG CCGCGCGCTTCTTCGAGCCGGTATTGCTTAACCTGGGCGAGGCTGGCCTGGTCAGGCAACGCGAAGGCGAAGGCTGGCGC CGGGTAATCGTGGAAAAACCCTTCGGCCACGATCTGCCCAGCGCCCAGCATCTCAATGCCACGGTCGCCAAGGTGCTGCA CGAAGATCAGGTGTTCCGCATCGATCATTTCCTGGGCAAGGAAACCGTGCAGAACATTCTCGCGTTCCGCTTCGCCAATG GCTTGTTCGAGCCGGTGTGGAATCGCGATCGCATCGACCATGTGCAGATCACCGCGGCCGAAACCATCGGCGTGGAAGGG CGCGGGCGGTTCTACGACCCTACCGGCTGCCTGCGCGACATGGTGCCGAACCATCTGTTCCAGTTGCTGGCGATGATTGC GATGGAACCGCCGGCGGCGTTCACTACCGAGGCGATGCATCGCCGTCGCGCCGAAGTGATCGAGGCGGTGCGCCCGATCA GGCCCGAAGATGTGGTGCGCGGGCAATATGCCTCCGGCGCGGTCAATCGCAATGCGGTGCCGGGCTATCGCGAAGAAGAC ACCGTGCCCGAGGATTCGGACACCGAAACCTATGTGGCGATGAAGCTGCAGGTCGACACCTGGCGCTGGGCCGGCGTGCC GTTCTACCTGCGCACCGGCAAGCGCCTGCGCGAACGCACCACCGAGATCGCGATCCGTTTCAAGCCCGCACCGCTGGCCC CGTTCCGCAGCACCGAAGTGGGCGGCTATGGCCCCGACTGGCTGGTGCTGCATATCCAGCCCGACGAGGGCATCTCGCTG CAGTTCGACGTCAAGCGCCCCGGCGCGCAGGTCGCACTGGCGCCGGTACGCATGGATTTCCGCTATCGCGACTGGTTTCC CAAGGAATACACCGTGGGCTACGAACGCCTGCTGCAGGACTGCATGAACGGCGAAGCCGGCCTGTTCCAGGACGCGGCCA TGGTGGAAGGCGCATGGCGCATCGTGCAACCGATCCTGGATGCATGGAAACAACCGCCCAGCGACTTCCCTAACTACGCC GCAGGCAGCGCCGGCCCCTCGGCCGCCGACGCCTTGCTGGCCATGAACGGCGGACACGCCTGGCGCGCCCTCACTCCCGG CCGCAAACCCCCACCACGCCGTCCCCCAGAAGCGCGTGCTGGTGCTGCGACGCCGGTGAAGAAAGCCACCAAGAAGATCG CGAAGAAAGCGAGCAAGGCGACATCCAAGCGTGCCGGTAAACCTGCTGCAAAATCCGCTGAAACCGGAGCCGATTCATCT AGCAAGCCTACGAAAAAATCGGGCGTCAAACGTGCAACGAAGGAGGTCGCAAAAAAGACTGCGAAGACCGTAAGGAAAAC CGCGGCCGGCAAAGTTGTCGCGACGAAGTTGGTTAGCAAGAGTGTAGCTGCGCGTAAAGCGCGCCGCTGA
Upstream 100 bases:
>100_bases AACGCATGCTCGGCAACTTCCCGCAAGGGTATTCCCACGTGGCCCTGGTCAATGCGGCATTGCGCCTGCATGGACGCATG GGCGAAAAGGAAACGCATCC
Downstream 100 bases:
>100_bases TTTTGCAAGCGCCGACCATAGCGTGGCGACTGGCGCTTGATTGGAGCAAGCGATGCAGCTTTTGACTTGCGTCATGATGC TCGTTACTCAGCTACAGGCA
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDEFAIVGMDHGDISERAWRTNMGQSMTQLLSSRDAEFQTD EFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVRQREGEGWR RVIVEKPFGHDLPSAQHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIRPEDVVRGQYASGAVNRNAVPGYREED TVPEDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISL QFDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAATPVKKATKKIAKKASKATSKRAGKPAAKSAETGADSS SKPTKKSGVKRATKEVAKKTAKTVRKTAAGKVVATKLVSKSVAARKARR
Sequences:
>Translated_609_residues MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDEFAIVGMDHGDISERAWRTNMGQSMTQLLSSRDAEFQTD EFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVRQREGEGWR RVIVEKPFGHDLPSAQHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIRPEDVVRGQYASGAVNRNAVPGYREED TVPEDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISL QFDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAATPVKKATKKIAKKASKATSKRAGKPAAKSAETGADSS SKPTKKSGVKRATKEVAKKTAKTVRKTAAGKVVATKLVSKSVAARKARR >Mature_608_residues SEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDEFAIVGMDHGDISERAWRTNMGQSMTQLLSSRDAEFQTDE FDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVRQREGEGWRR VIVEKPFGHDLPSAQHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEGR GRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIRPEDVVRGQYASGAVNRNAVPGYREEDT VPEDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQ FDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYAA GSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAATPVKKATKKIAKKASKATSKRAGKPAAKSAETGADSSS KPTKKSGVKRATKEVAKKTAKTVRKTAAGKVVATKLVSKSVAARKARR
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=490, Percent_Identity=34.2857142857143, Blast_Score=284, Evalue=2e-76, Organism=Homo sapiens, GI108773793, Length=490, Percent_Identity=34.2857142857143, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI52145310, Length=371, Percent_Identity=30.9973045822102, Blast_Score=160, Evalue=3e-39, Organism=Escherichia coli, GI1788158, Length=504, Percent_Identity=37.1031746031746, Blast_Score=337, Evalue=1e-93, Organism=Caenorhabditis elegans, GI17538218, Length=505, Percent_Identity=33.6633663366337, Blast_Score=297, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6324088, Length=487, Percent_Identity=33.6755646817248, Blast_Score=266, Evalue=5e-72, Organism=Drosophila melanogaster, GI24643350, Length=504, Percent_Identity=32.3412698412698, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24643352, Length=504, Percent_Identity=32.3412698412698, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI221513548, Length=484, Percent_Identity=29.7520661157025, Blast_Score=204, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 67738; Mature: 67607
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDEFAIVGMDHGDISERAWRT CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH NMGQSMTQLLSSRDAEFQTDEFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKR HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YGTQGNVLFYLATAARFFEPVLLNLGEAGLVRQREGEGWRRVIVEKPFGHDLPSAQHLNA HCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH TVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCC RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIRPEDVVR CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHC GQYASGAVNRNAVPGYREEDTVPEDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCEECCCHHHHHHH TEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQFDVKRPGAQVALAPVRMDF HEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECC RYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAATPVKKATKKIAKKASKA CCCCCCHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TSKRAGKPAAKSAETGADSSSKPTKKSGVKRATKEVAKKTAKTVRKTAAGKVVATKLVSK HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SVAARKARR HHHHHHCCC >Mature Secondary Structure SEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDEFAIVGMDHGDISERAWRT CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH NMGQSMTQLLSSRDAEFQTDEFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKR HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YGTQGNVLFYLATAARFFEPVLLNLGEAGLVRQREGEGWRRVIVEKPFGHDLPSAQHLNA HCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH TVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCC RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIRPEDVVR CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHC GQYASGAVNRNAVPGYREEDTVPEDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCEECCCHHHHHHH TEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQFDVKRPGAQVALAPVRMDF HEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECC RYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAATPVKKATKKIAKKASKA CCCCCCHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TSKRAGKPAAKSAETGADSSSKPTKKSGVKRATKEVAKKTAKTVRKTAAGKVVATKLVSK HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SVAARKARR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]