| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is argi [H]
Identifier: 78049658
GI number: 78049658
Start: 4698143
End: 4699066
Strand: Reverse
Name: argi [H]
Synonym: XCV4102
Alternate gene names: 78049658
Gene position: 4699066-4698143 (Counterclockwise)
Preceding gene: 78049664
Following gene: 78049657
Centisome position: 90.74
GC content: 66.67
Gene sequence:
>924_bases ATGGCAACGCAGTACGTGCCGGTTTCCTTGATTGGCGTTCCCACCGACATCGGCGCGGGCCACCGCGGCGCGCGCATGGG GCCGGAGGCGCTACGCATCGCCGGCTTGCAGGAGGCGCTGGTCGGCCGCGGCGTGGAGGTGCGCGATCTGGGCAATCTGG ATGGTCCGCGCAATCCCTGGCAGGCGCCGCAGGCCGGCTACCGGCATCTGGACGAAGTGGTGGCGTGGAACCAGGCGCTG ATGGACGCCAGCTACGCCGAACTGCGTGCCGGGCGCATGCCGATCATGCTCGGTGGCGACCATTGCCTGGGTATCGGCTC GATCACGGCGGTGGCCAAGTACTGCCGCGAGCAGGGCAGGCCGTTGCGGGTGCTGTGGCTGGATGCGCATTCGGATTTCA ACACCAGCGAGGTGACTCCTTCGGGCAACGTGCACGGCATGCCGGTGGCCTGCCTGTGCGGGCTGGGGCCCGAGTCGCTG ACCCACCTGGGCGGCAGTGCGCCGGCGTTGTTGCCCGAGCAGGTGCGGCAGATCGGCATCCGCTCGGTGGACCCGGAGGA AAAGCGGCTGATCAAGCAGCACCGCATCGATGTGTACGACATGCGCTACATCGACGAAGCCGGTATGAAGCGCACCATGG AAGCGGCGTTGCAGGGCATGAGCGCCGATACCCACCTGCACGTGAGTTTCGATGTGGACTTCCTCGACCCCAGCATCGCG CCGGGCGTGGGCACCACGGTGCCCGGTGGCCCCAACTACCGCGAGGCGCAACTGGTGATGGAAATGATTGCCGACACCGG GCGCATGGGCTCGTTGGATATCGTCGAACTCAACCCGGTGCTGGACAACCGCAATGCGACCGCCGAACTGGCGGTGGATC TGGTCGAGAGCCTGTTCGGCAAGTCGACGCTGATGCGGGATTGA
Upstream 100 bases:
>100_bases TCGCACTGTTCAGTACGGGCGACATGCGTGCTGCGCTGCCGCGCGTCACTGTGCGGGCGGGCAACTAGACTGCACGGCTT TATCGATACTGGAGCAATGC
Downstream 100 bases:
>100_bases TCCGGACCGAGCGCACCGGGACGCGTTCACATCAAATCCACGGCCGCGCAGTCAGATTTGGCGCCAAGCCAGGTGCGCTG GCACCGTGATAGAACGAGGA
Product: arginase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL MDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPESL THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQGMSADTHLHVSFDVDFLDPSIA PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD
Sequences:
>Translated_307_residues MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL MDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPESL THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQGMSADTHLHVSFDVDFLDPSIA PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD >Mature_306_residues ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQALM DASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPESLT HLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQGMSADTHLHVSFDVDFLDPSIAP GVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family [H]
Homologues:
Organism=Homo sapiens, GI4502215, Length=308, Percent_Identity=36.038961038961, Blast_Score=178, Evalue=4e-45, Organism=Homo sapiens, GI10947139, Length=309, Percent_Identity=34.3042071197411, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71996843, Length=207, Percent_Identity=32.8502415458937, Blast_Score=111, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6325146, Length=299, Percent_Identity=32.1070234113712, Blast_Score=146, Evalue=3e-36, Organism=Drosophila melanogaster, GI24638886, Length=304, Percent_Identity=33.2236842105263, Blast_Score=164, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014033 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.1 [H]
Molecular weight: Translated: 33139; Mature: 33008
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00148 ARGINASE_2 ; PS01053 ARGINASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPW CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC QAPQAGYRHLDEVVAWNQALMDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPESLTHLGGSAPALLPEQVRQIGI CEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEECCCHHHHHHCCCCCCCCCHHHHHHCCC RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQGMSADTHLHVSFDVDFLDPSIA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCC PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC KSTLMRD CHHHCCC >Mature Secondary Structure ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPW CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC QAPQAGYRHLDEVVAWNQALMDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPESLTHLGGSAPALLPEQVRQIGI CEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEECCCHHHHHHCCCCCCCCCHHHHHHCCC RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQGMSADTHLHVSFDVDFLDPSIA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCC PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC KSTLMRD CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9375792 [H]