| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049617
Identifier: 78049617
GI number: 78049617
Start: 4661514
End: 4662608
Strand: Reverse
Name: 78049617
Synonym: XCV4061
Alternate gene names: NA
Gene position: 4662608-4661514 (Counterclockwise)
Preceding gene: 78049618
Following gene: 78049616
Centisome position: 90.04
GC content: 63.38
Gene sequence:
>1095_bases ATGGCACAGACACACTATCGGCAGGTGCTTGGGCATGCCACGCGCGTGGTGCCCGAGCATGGTCATGAGCGTGCAACGCA CGCATGGGTCTGTCGCGAGGTCGCGCATTTGCTGGGCGTGCCCGATGCCGGCGTCGCTGGCGATGGCGTGATCGAAGTTG GAACATTCCACGTACCCGATGACACGCTCACTACCGCGCAAGCGCGCGGGCTGGGCATCCACGGCGTCGGTGACTTGCTC GGCGGTATCGTGCCGCATGCGTTTCTGGCCACCAAGGTCATCGGTCACCCACTGGTTTCTGACGACGCGGCAAGCACTGC GGGCTGGGACCAGGCGCTGGCCATGTCGCTGATTCCCGCCACGCTGCCGGGCTACACCGCGTTTTCTCGCCCGGATGCGA TGCATGCGTTCGAGGCGCTGTCTGATGGTGGAGACGTGCGCCTGAAGCTGCCCACCGGCGTGGGCGGCAACGACCAATGG CGCATTGCCGACGCATCGCAGCTGGCGCAGGTACTGGATAGCCTGCCCGATACCTATCTAGGCACGCATGGCGGCGTGCT GGAACGCAATATCTTGCAGCCAACGACGCACAGCGTAGGCGAGTTGTGTCTTGCCGGCGTCCAGATTGCGTATTACGGCA CGCAATGCAGCGTGCCCGATGCGGACGGCAGCGATGTGTATGGCGGCTCGTCGCTGTGCGTGTACCGCGGGTCGTTGGAG GCACTGATGGCGACAGCTTTACCTTCGCTGGAGCGACGGGTGGTCGAGCAGGCGTGCAGGTACGATCGATGCGTCACCGC CGCTTATCCTGAGCTGCAGATTTCCCGCCGCAACTACGATGTGGTCAGCGGTCAGGATGCTGGCGATGTCCCGGTATGCG GCGTGCTGGAACAATCCTGGCGAATCGGTGGCGCAACCCCGGCAGAACTCGCTGCAATCGCCGCCTTTCAGCAAGATCCC GCATTGCAGTGGGTAAGGGCGTCTACACACGAAATCTATCAGGGCCAGCCGCCGGCCGATGCGCAGGTCTACTATCGCGC AACCCAATCCGGTCCAGGGCCGCGCTACAAATACAGGAGGATCTCTGCGACGTAA
Upstream 100 bases:
>100_bases GCACTGAAGTAAGGCTCCGGCGATACCCACTGCCACGACTCGTCCCTCAGCTGCGACCGAGGCCAGCAACGACGCGCGAT CACGCCGCAGGGGAGATGTC
Downstream 100 bases:
>100_bases TGGAAGCCAAACTTTCCAGCATCGACATTCCGGTCGGCCAGGACGCACTCAGCGGCACCTTGCTCACGCCCTCAGGCATG CCTGCAGTGTTGTTCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MAQTHYRQVLGHATRVVPEHGHERATHAWVCREVAHLLGVPDAGVAGDGVIEVGTFHVPDDTLTTAQARGLGIHGVGDLL GGIVPHAFLATKVIGHPLVSDDAASTAGWDQALAMSLIPATLPGYTAFSRPDAMHAFEALSDGGDVRLKLPTGVGGNDQW RIADASQLAQVLDSLPDTYLGTHGGVLERNILQPTTHSVGELCLAGVQIAYYGTQCSVPDADGSDVYGGSSLCVYRGSLE ALMATALPSLERRVVEQACRYDRCVTAAYPELQISRRNYDVVSGQDAGDVPVCGVLEQSWRIGGATPAELAAIAAFQQDP ALQWVRASTHEIYQGQPPADAQVYYRATQSGPGPRYKYRRISAT
Sequences:
>Translated_364_residues MAQTHYRQVLGHATRVVPEHGHERATHAWVCREVAHLLGVPDAGVAGDGVIEVGTFHVPDDTLTTAQARGLGIHGVGDLL GGIVPHAFLATKVIGHPLVSDDAASTAGWDQALAMSLIPATLPGYTAFSRPDAMHAFEALSDGGDVRLKLPTGVGGNDQW RIADASQLAQVLDSLPDTYLGTHGGVLERNILQPTTHSVGELCLAGVQIAYYGTQCSVPDADGSDVYGGSSLCVYRGSLE ALMATALPSLERRVVEQACRYDRCVTAAYPELQISRRNYDVVSGQDAGDVPVCGVLEQSWRIGGATPAELAAIAAFQQDP ALQWVRASTHEIYQGQPPADAQVYYRATQSGPGPRYKYRRISAT >Mature_363_residues AQTHYRQVLGHATRVVPEHGHERATHAWVCREVAHLLGVPDAGVAGDGVIEVGTFHVPDDTLTTAQARGLGIHGVGDLLG GIVPHAFLATKVIGHPLVSDDAASTAGWDQALAMSLIPATLPGYTAFSRPDAMHAFEALSDGGDVRLKLPTGVGGNDQWR IADASQLAQVLDSLPDTYLGTHGGVLERNILQPTTHSVGELCLAGVQIAYYGTQCSVPDADGSDVYGGSSLCVYRGSLEA LMATALPSLERRVVEQACRYDRCVTAAYPELQISRRNYDVVSGQDAGDVPVCGVLEQSWRIGGATPAELAAIAAFQQDPA LQWVRASTHEIYQGQPPADAQVYYRATQSGPGPRYKYRRISAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38688; Mature: 38557
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTHYRQVLGHATRVVPEHGHERATHAWVCREVAHLLGVPDAGVAGDGVIEVGTFHVPD CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECEEECCC DTLTTAQARGLGIHGVGDLLGGIVPHAFLATKVIGHPLVSDDAASTAGWDQALAMSLIPA CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH TLPGYTAFSRPDAMHAFEALSDGGDVRLKLPTGVGGNDQWRIADASQLAQVLDSLPDTYL CCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHCCHHHC GTHGGVLERNILQPTTHSVGELCLAGVQIAYYGTQCSVPDADGSDVYGGSSLCVYRGSLE CCCCCHHHHCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHH ALMATALPSLERRVVEQACRYDRCVTAAYPELQISRRNYDVVSGQDAGDVPVCGVLEQSW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHC RIGGATPAELAAIAAFQQDPALQWVRASTHEIYQGQPPADAQVYYRATQSGPGPRYKYRR CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEE ISAT ECCC >Mature Secondary Structure AQTHYRQVLGHATRVVPEHGHERATHAWVCREVAHLLGVPDAGVAGDGVIEVGTFHVPD CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECEEECCC DTLTTAQARGLGIHGVGDLLGGIVPHAFLATKVIGHPLVSDDAASTAGWDQALAMSLIPA CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH TLPGYTAFSRPDAMHAFEALSDGGDVRLKLPTGVGGNDQWRIADASQLAQVLDSLPDTYL CCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHCCHHHC GTHGGVLERNILQPTTHSVGELCLAGVQIAYYGTQCSVPDADGSDVYGGSSLCVYRGSLE CCCCCHHHHCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHH ALMATALPSLERRVVEQACRYDRCVTAAYPELQISRRNYDVVSGQDAGDVPVCGVLEQSW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHC RIGGATPAELAAIAAFQQDPALQWVRASTHEIYQGQPPADAQVYYRATQSGPGPRYKYRR CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEE ISAT ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA