| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is ctaE [H]
Identifier: 78049558
GI number: 78049558
Start: 4591939
End: 4592814
Strand: Reverse
Name: ctaE [H]
Synonym: XCV4002
Alternate gene names: 78049558
Gene position: 4592814-4591939 (Counterclockwise)
Preceding gene: 78049559
Following gene: 78049556
Centisome position: 88.69
GC content: 61.3
Gene sequence:
>876_bases ATGGCCGATCACAGTCCCAACGCCGATGCGTATTTCGTCCCGAGCCAGAGCAAATGGCCCTTTGTCGGGTCGATTGCGAT GTTCGTGATGATGATCGGCGTGGCCAGCTGGCTCAACGACGCGGCATGGGGGCGCTGGACCTTCTTCGCCGGCGTGGCGA TGCTGCTGGCGACGTTGTTCATGTGGTTTGGCGATGTCATCCGCGAATCCAATGCCGGGCATTACAACCGCCAGGTGGAT GGCTCGTTCCGCATGGGGATGGTGTGGTTCATCTTCTCCGAGGCGATGTTTTTCTGCGCTTTCTTCGGTGCGCTGTTTTA CACGCGTGTGCTGACGCTGCCCTGGCTGGGCGGGGAAGGCGACGGCGTGATGACCAACGAGCTGCTATGGAATGGTTATT CCGCTGCGTGGCCGACCAATGGCCCGGGCACCATCGGTGGGCAGTTCCAGACCATTCCGGCCTGGGGCCTGCCGCTGATC AACACGCTGATCCTGCTCAGTTCCGGCGTGACCTTGACCATCGCCCACCACGCGCTCAAGGGAGGGCGCCGCGGCGCGCT GCTGTTGTGGCTGGGGTTGACCGTGCTGCTGGGCTGCGTGTTCCTGTTCCTGCAGGCCGAGGAATATATCCACGCCTATA CCGAGCTCAATCTCACCCTGGGCTCGGGCATCTATGGTTCGACCTTCTTCATGCTGACCGGCTTCCACGGCATGCATGTG CTGCTGGGCACCATCATGCTGGCAGTGATGTGGCTGCGCGCGGCGAAGGGGCATTTCAACCGCGACAACCACTTCGCTTT CGAAGCGGCCGCGTGGTACTGGCACTTCGTCGACGTGGTGTGGCTGGCGCTGTTTTTGTTCGTGTATGTCCTTTGA
Upstream 100 bases:
>100_bases ACGCGCTGACCTCCGAACTGCAGGGCGGAGGCGCAGCTGGCGCGCCACGCGCTGCGCCGTAACCTTCCATCCACCCGTAC CACGACACGGAAGCAACGCC
Downstream 100 bases:
>100_bases GGCGGGGATTCGGGATTGGTGATTCGGGATTCGTAAAAGCGGCAGGCTTTAGTTTTTACGAATCCCCAATGCCGAATCCC CAATCCCGGCTCCTCAGCGG
Product: cytochrome c oxidase, subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MADHSPNADAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFAGVAMLLATLFMWFGDVIRESNAGHYNRQVD GSFRMGMVWFIFSEAMFFCAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLI NTLILLSSGVTLTIAHHALKGGRRGALLLWLGLTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV LLGTIMLAVMWLRAAKGHFNRDNHFAFEAAAWYWHFVDVVWLALFLFVYVL
Sequences:
>Translated_291_residues MADHSPNADAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFAGVAMLLATLFMWFGDVIRESNAGHYNRQVD GSFRMGMVWFIFSEAMFFCAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLI NTLILLSSGVTLTIAHHALKGGRRGALLLWLGLTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV LLGTIMLAVMWLRAAKGHFNRDNHFAFEAAAWYWHFVDVVWLALFLFVYVL >Mature_290_residues ADHSPNADAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFAGVAMLLATLFMWFGDVIRESNAGHYNRQVDG SFRMGMVWFIFSEAMFFCAFFGALFYTRVLTLPWLGGEGDGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLIN TLILLSSGVTLTIAHHALKGGRRGALLLWLGLTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHVL LGTIMLAVMWLRAAKGHFNRDNHFAFEAAAWYWHFVDVVWLALFLFVYVL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=284, Percent_Identity=38.0281690140845, Blast_Score=169, Evalue=3e-42, Organism=Escherichia coli, GI1786633, Length=170, Percent_Identity=30.5882352941176, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6226542, Length=274, Percent_Identity=29.9270072992701, Blast_Score=108, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32534; Mature: 32403
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHSPNADAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFAGVAMLLATLF CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MWFGDVIRESNAGHYNRQVDGSFRMGMVWFIFSEAMFFCAFFGALFYTRVLTLPWLGGEG HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLINTLILLSSGVTLTIAHHALK CCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHC GGRRGALLLWLGLTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCHHHHH LLGTIMLAVMWLRAAKGHFNRDNHFAFEAAAWYWHFVDVVWLALFLFVYVL HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure ADHSPNADAYFVPSQSKWPFVGSIAMFVMMIGVASWLNDAAWGRWTFFAGVAMLLATLF CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MWFGDVIRESNAGHYNRQVDGSFRMGMVWFIFSEAMFFCAFFGALFYTRVLTLPWLGGEG HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DGVMTNELLWNGYSAAWPTNGPGTIGGQFQTIPAWGLPLINTLILLSSGVTLTIAHHALK CCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHC GGRRGALLLWLGLTVLLGCVFLFLQAEEYIHAYTELNLTLGSGIYGSTFFMLTGFHGMHV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCHHHHH LLGTIMLAVMWLRAAKGHFNRDNHFAFEAAAWYWHFVDVVWLALFLFVYVL HHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]