Click here to switch to the map view.

The map label for this gene is 78049529

Identifier: 78049529

GI number: 78049529

Start: 4564798

End: 4564974

Strand: Reverse

Name: 78049529

Synonym: XCV3973

Alternate gene names: NA

Gene position: 4564974-4564798 (Counterclockwise)

Preceding gene: 78049530

Following gene: 78049528

Centisome position: 88.15

GC content: 64.41

Gene sequence:

>177_bases
GTGGACACCGACAGCGATGGCGCCATCAGCAAGCAGGAAGCGCAGGTCAACGCCGGCCTCGCGCAGATCTTCGATCAGGC
CGACGGCAACACCGATGGCAAGCTGACCCCGGATGAGTACAAGGCCTTCGTCGCCAAGCAGCAGGGTGGCGGTGCCACCG
GTTCGCAGGGCAACTAA

Upstream 100 bases:

>100_bases
GCAAAGCACTTCTCAGGACGCAGCGGCGCAATCGGGCAGTTCGGCCACCTCCGCACAATCGAGCGGTGCAAGCTCCGGTG
GTGGCTAGACCTGGGCCAGC

Downstream 100 bases:

>100_bases
GCCACGTTCGACATAGCGCTGGTTTGAGGAAGTAAGGCAAGCAACGCGCCGGCACAGAGTCCCGTCGGCGCTAAGCGACC
AGCTTTGACCTGCAACTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MDTDSDGAISKQEAQVNAGLAQIFDQADGNTDGKLTPDEYKAFVAKQQGGGATGSQGN

Sequences:

>Translated_58_residues
MDTDSDGAISKQEAQVNAGLAQIFDQADGNTDGKLTPDEYKAFVAKQQGGGATGSQGN
>Mature_58_residues
MDTDSDGAISKQEAQVNAGLAQIFDQADGNTDGKLTPDEYKAFVAKQQGGGATGSQGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5918; Mature: 5918

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDSDGAISKQEAQVNAGLAQIFDQADGNTDGKLTPDEYKAFVAKQQGGGATGSQGN
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDTDSDGAISKQEAQVNAGLAQIFDQADGNTDGKLTPDEYKAFVAKQQGGGATGSQGN
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA