Click here to switch to the map view.

The map label for this gene is 78049398

Identifier: 78049398

GI number: 78049398

Start: 4428095

End: 4428289

Strand: Reverse

Name: 78049398

Synonym: XCV3842

Alternate gene names: NA

Gene position: 4428289-4428095 (Counterclockwise)

Preceding gene: 78049399

Following gene: 78049396

Centisome position: 85.51

GC content: 56.92

Gene sequence:

>195_bases
ATGACGCCGCTGGACAAACCCTTACGTCGCGACCTGCAGATCGGCGATCAGGCATATACCTTGATCATCGATCCGCAAGG
TTTGAAATTGGTCGAGAAAGGCAGGCGCAAAGGCGTGACCTTGCGCTGGGAAGAACTGGTCAGCGGCGACGCTGCGCTGG
CCAGTGCATTGCAGGCTTCGCTTGAAGATCGTTAG

Upstream 100 bases:

>100_bases
CCTCGGCGCCGATGCGGCTAGGCTTGCGCATCGCTGCACTCAAGCATCGATCCACGTCGATGCGGTACAACGGCGATCGA
ACCTTTTGCGAGACCGTGCG

Downstream 100 bases:

>100_bases
CGTGGCGGTGCGGGGCGGCGTGTGAAGCGCGAATGGAACCACTGCGTGCACCGCCTGGCGGGCGCGGCTGGTGACCGTGC
AGTCGCGCGTCCTTTGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MTPLDKPLRRDLQIGDQAYTLIIDPQGLKLVEKGRRKGVTLRWEELVSGDAALASALQASLEDR

Sequences:

>Translated_64_residues
MTPLDKPLRRDLQIGDQAYTLIIDPQGLKLVEKGRRKGVTLRWEELVSGDAALASALQASLEDR
>Mature_63_residues
TPLDKPLRRDLQIGDQAYTLIIDPQGLKLVEKGRRKGVTLRWEELVSGDAALASALQASLEDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7117; Mature: 6986

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLDKPLRRDLQIGDQAYTLIIDPQGLKLVEKGRRKGVTLRWEELVSGDAALASALQAS
CCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHHH
LEDR
CCCC
>Mature Secondary Structure 
TPLDKPLRRDLQIGDQAYTLIIDPQGLKLVEKGRRKGVTLRWEELVSGDAALASALQAS
CCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHHH
LEDR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA