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The map label for this gene is atpH [H]

Identifier: 78049326

GI number: 78049326

Start: 4355934

End: 4356461

Strand: Reverse

Name: atpH [H]

Synonym: XCV3770

Alternate gene names: 78049326

Gene position: 4356461-4355934 (Counterclockwise)

Preceding gene: 78049327

Following gene: 78049325

Centisome position: 84.13

GC content: 67.61

Gene sequence:

>528_bases
ATGAGTCAGGCCCTCACCCTTGCCCGTCCCTACGGCCGTGCCGCGTTTGCGATCGCGCGTGAGGGCGGCAACTTCGCGCC
CTGGTCCGATGCGCTGGCGTTTTCGGCGCAGGTGGCCGGCGACCCGCGCGTGGCCGCATTGCTGCTCAACCCGGCCCTTG
GCCAGGAACAGGCAGTGACGCTGCTGGCCCCGCCGCAGGCGGGCGAGGACTATCTGCGTTTCCTCGGCGTGCTTGCCGAT
GCGCAGCGGCTGTCGCTGCTGCCGGAAGTGGCAGGCTTGTACGAACAACTGCGTGCCGAGGCCGAACATGTCGTCAAGGC
GACGGTGACCTCGGCCGCTGCAATGAGCCAGACCGAACTCGACACGATCGCTGCTGCGCTGAAGAAGCGCTTCGGCCGCG
ATGTGGACATCACCACCGCAGTCGATGCGTCGCTGATCGGCGGCGCGGTGATCGACACCGGCGACGTGGTCATCGACGGC
TCGCTGAAGGGCAAGCTTGCGCGTCTGCAAAGCTCGCTCGCCCACTGA

Upstream 100 bases:

>100_bases
GGTGCTGGCCGTCAGCGGTGCAGAAAAGCTGCTCAAGCGCGAAATCGATGCCAACGCCCACAAGGCGCTGCTCGACGAGC
TGGCGGCGGAGATTTAAGCG

Downstream 100 bases:

>100_bases
ATTCACATAAACGCACGGCCCTCGCGGCCGGCACCTAGGACTGAACGATGGCAACCACGCTCAACCCCTCCGAAATCAGC
GACCTGATCAAGACCCGCAT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSQALTLARPYGRAAFAIAREGGNFAPWSDALAFSAQVAGDPRVAALLLNPALGQEQAVTLLAPPQAGEDYLRFLGVLAD
AQRLSLLPEVAGLYEQLRAEAEHVVKATVTSAAAMSQTELDTIAAALKKRFGRDVDITTAVDASLIGGAVIDTGDVVIDG
SLKGKLARLQSSLAH

Sequences:

>Translated_175_residues
MSQALTLARPYGRAAFAIAREGGNFAPWSDALAFSAQVAGDPRVAALLLNPALGQEQAVTLLAPPQAGEDYLRFLGVLAD
AQRLSLLPEVAGLYEQLRAEAEHVVKATVTSAAAMSQTELDTIAAALKKRFGRDVDITTAVDASLIGGAVIDTGDVVIDG
SLKGKLARLQSSLAH
>Mature_174_residues
SQALTLARPYGRAAFAIAREGGNFAPWSDALAFSAQVAGDPRVAALLLNPALGQEQAVTLLAPPQAGEDYLRFLGVLADA
QRLSLLPEVAGLYEQLRAEAEHVVKATVTSAAAMSQTELDTIAAALKKRFGRDVDITTAVDASLIGGAVIDTGDVVIDGS
LKGKLARLQSSLAH

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Escherichia coli, GI1790173, Length=172, Percent_Identity=38.953488372093, Blast_Score=117, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 18209; Mature: 18078

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQALTLARPYGRAAFAIAREGGNFAPWSDALAFSAQVAGDPRVAALLLNPALGQEQAVT
CCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE
LLAPPQAGEDYLRFLGVLADAQRLSLLPEVAGLYEQLRAEAEHVVKATVTSAAAMSQTEL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTIAAALKKRFGRDVDITTAVDASLIGGAVIDTGDVVIDGSLKGKLARLQSSLAH
HHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SQALTLARPYGRAAFAIAREGGNFAPWSDALAFSAQVAGDPRVAALLLNPALGQEQAVT
CCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEE
LLAPPQAGEDYLRFLGVLADAQRLSLLPEVAGLYEQLRAEAEHVVKATVTSAAAMSQTEL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTIAAALKKRFGRDVDITTAVDASLIGGAVIDTGDVVIDGSLKGKLARLQSSLAH
HHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]