| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is glmS [H]
Identifier: 78049310
GI number: 78049310
Start: 4337584
End: 4339413
Strand: Reverse
Name: glmS [H]
Synonym: XCV3754
Alternate gene names: 78049310
Gene position: 4339413-4337584 (Counterclockwise)
Preceding gene: 78049318
Following gene: 78049309
Centisome position: 83.8
GC content: 64.37
Gene sequence:
>1830_bases ATGTGCGGCATTGTCGGAGCGATCGCCGGGCGCGATGTGGTCCCGGTCCTGATCGAAGGACTCAAGCGCCTGGAATACCG CGGCTACGATTCCTCCGGCATTGCGGTGCTCGACGGCGTGCAGGTGCGCCGGGTGCGTCGCACCGGGCGTGTGGCCGAGA TGGCGCAGGCCGCGCAGGCCGAACAGTTCGGCGCCACGCTGGGGATCGGGCACACCCGCTGGGCCACCCATGGCGGCGTC ACCGAAGCCAACGCGCACCCGCACATTAGCGCCGGCGTGGCGCTGGTGCATAACGGCATCATCGAAAACCACGAGGAGCA GCGCGAAAAATTGCGCGCGCTTGGCTATACCTTCGAGTCGCAGACCGACACCGAGGTTATCGCGCATCTGATCCATCATC ATCTGGGCAGCGCCGGCGACCTGCTCACCGCGCTGCAGCGCACCGTCAAGGAACTCACCGGTGCCTATGCGCTGGCGGTG ATGAGCCAGGCCGAACCGGAACGCTTCGTCTGCGCGCGCATGGGCTGCCCCTTGCTGATCGGGGTGGGTGAGGGGGAAAA CTTCGTCGCTTCCGACGTGTCGGCGATCGTGCAGGCCACGCGCCAGGTGATCTTCCTCGAAGAAGGCGACACCGCCGAAT TGCACCGCGATGGCGTGCGCATCTTCGACGGCAATGATGCACCGGTGGAGCGCCCGCTGCACCTGTCGGACGTGTCGCTG GCCTCGCTGGAACTGGGCCCGTTCCGGCATTTCATGCAGAAGGAAATCCACGAGCAGCCGCGCGCCTTGGCCGACACCAT CGAGGCGGCGATCGATGCCAAGGGTTTCCCGGCATCGCTGTTCGGCGCCAACGCAGAAGCGGTGTTGCGCGACATCGAAG GCGTGCAGATCCTGGCCTGCGGCACCAGCTACTACGCCGGCATGACCGCCCGTTACTGGATCGAAGCCATTGCGGGGCTG CCGTGCAGCGTGGAGATCGCCAGCGAATACCGCTACCGCGCCGCGTATGCCAACCCGAAGCATCTGATCGTGACCATCTC CCAGTCCGGCGAAACGCTGGACACGATGGAAGCGCTGAAATACGCCAAATCGCTGGGGCATTTGCACACGCTGTCGATCT GCAATGTGCCGGAAAGTGCGATCCCGCGCGCTAGCGAGCTGGTCTGCTACACGCGTGCCGGCGCCGAGATCGGCGTGGCC TCGACCAAGGCCTTCACCACCCAGCTGGCGGTGTTGTTCCAGCTCACCATGGTGCTGGGGAAGTTGCAGGGCCGCATCAG TGACGCCGAAGAAGCCGAGTATCTGGAGCAGCTGCGCTTTTTGCCCGGCAGCGTGCAGCATGCATTGAATCTTGAACCGC AGATCATGGCCTGGGCCGAACGATTTTCGCCGAAGGAGAATGCGCTGTTCCTCGGTCGCGGCCTGCATTATCCGATTGCA TTGGAAGGCGCGCTCAAGCTCAAGGAAATCTCCTATATCCACGCCGAAGCGTATCCGGCCGGCGAGTTGAAGCATGGGCC GCTGGCACTGGTGGATGCGGCGATGCCGGTGGTGGTGATCGCACCGAACGACCGCCTGCTGGAGAAGGTCAAATCCAACA TGCAGGAAGTGCGCGCACGCGGCGGCGAGCTGTTCGTGTTCGCCGACCAGGACAGCCACTTCAGCGACTCCGAAGGCGTG CATGTCATCCGCACCCCACGCCATGCCGGCGTGCTGTCGCCGGTGATCCACACCATCCCGGTGCAGCTGCTGGCTTACCA CACCGCCCTGGCACGCGGCACCGATGTGGACAAGCCGCGCAATCTGGCCAAATCGGTGACGGTGGAGTAA
Upstream 100 bases:
>100_bases TCCGCGGACACTGGGGGCGGACACGCTGTCCGGGCACGGTCATGCAGCGGACAAGAGCGGACACGCTAAAATGTCCGACT TCTTTTGCGAGAGCTGTCCT
Downstream 100 bases:
>100_bases GCGCTGCCGCGGTGTCGTCTGCGCGCACTGCCAGCTGCATGCAGTCGGTGCATGCACGCAGTGCATGTTCGGCTCTGTCG CTGTCATGTTCCAGGATGGC
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MCGIVGAIAGRDVVPVLIEGLKRLEYRGYDSSGIAVLDGVQVRRVRRTGRVAEMAQAAQAEQFGATLGIGHTRWATHGGV TEANAHPHISAGVALVHNGIIENHEEQREKLRALGYTFESQTDTEVIAHLIHHHLGSAGDLLTALQRTVKELTGAYALAV MSQAEPERFVCARMGCPLLIGVGEGENFVASDVSAIVQATRQVIFLEEGDTAELHRDGVRIFDGNDAPVERPLHLSDVSL ASLELGPFRHFMQKEIHEQPRALADTIEAAIDAKGFPASLFGANAEAVLRDIEGVQILACGTSYYAGMTARYWIEAIAGL PCSVEIASEYRYRAAYANPKHLIVTISQSGETLDTMEALKYAKSLGHLHTLSICNVPESAIPRASELVCYTRAGAEIGVA STKAFTTQLAVLFQLTMVLGKLQGRISDAEEAEYLEQLRFLPGSVQHALNLEPQIMAWAERFSPKENALFLGRGLHYPIA LEGALKLKEISYIHAEAYPAGELKHGPLALVDAAMPVVVIAPNDRLLEKVKSNMQEVRARGGELFVFADQDSHFSDSEGV HVIRTPRHAGVLSPVIHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE
Sequences:
>Translated_609_residues MCGIVGAIAGRDVVPVLIEGLKRLEYRGYDSSGIAVLDGVQVRRVRRTGRVAEMAQAAQAEQFGATLGIGHTRWATHGGV TEANAHPHISAGVALVHNGIIENHEEQREKLRALGYTFESQTDTEVIAHLIHHHLGSAGDLLTALQRTVKELTGAYALAV MSQAEPERFVCARMGCPLLIGVGEGENFVASDVSAIVQATRQVIFLEEGDTAELHRDGVRIFDGNDAPVERPLHLSDVSL ASLELGPFRHFMQKEIHEQPRALADTIEAAIDAKGFPASLFGANAEAVLRDIEGVQILACGTSYYAGMTARYWIEAIAGL PCSVEIASEYRYRAAYANPKHLIVTISQSGETLDTMEALKYAKSLGHLHTLSICNVPESAIPRASELVCYTRAGAEIGVA STKAFTTQLAVLFQLTMVLGKLQGRISDAEEAEYLEQLRFLPGSVQHALNLEPQIMAWAERFSPKENALFLGRGLHYPIA LEGALKLKEISYIHAEAYPAGELKHGPLALVDAAMPVVVIAPNDRLLEKVKSNMQEVRARGGELFVFADQDSHFSDSEGV HVIRTPRHAGVLSPVIHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE >Mature_609_residues MCGIVGAIAGRDVVPVLIEGLKRLEYRGYDSSGIAVLDGVQVRRVRRTGRVAEMAQAAQAEQFGATLGIGHTRWATHGGV TEANAHPHISAGVALVHNGIIENHEEQREKLRALGYTFESQTDTEVIAHLIHHHLGSAGDLLTALQRTVKELTGAYALAV MSQAEPERFVCARMGCPLLIGVGEGENFVASDVSAIVQATRQVIFLEEGDTAELHRDGVRIFDGNDAPVERPLHLSDVSL ASLELGPFRHFMQKEIHEQPRALADTIEAAIDAKGFPASLFGANAEAVLRDIEGVQILACGTSYYAGMTARYWIEAIAGL PCSVEIASEYRYRAAYANPKHLIVTISQSGETLDTMEALKYAKSLGHLHTLSICNVPESAIPRASELVCYTRAGAEIGVA STKAFTTQLAVLFQLTMVLGKLQGRISDAEEAEYLEQLRFLPGSVQHALNLEPQIMAWAERFSPKENALFLGRGLHYPIA LEGALKLKEISYIHAEAYPAGELKHGPLALVDAAMPVVVIAPNDRLLEKVKSNMQEVRARGGELFVFADQDSHFSDSEGV HVIRTPRHAGVLSPVIHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI205277386, Length=693, Percent_Identity=35.9307359307359, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI4826742, Length=687, Percent_Identity=35.6622998544396, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI29570798, Length=178, Percent_Identity=29.7752808988764, Blast_Score=70, Evalue=8e-12, Organism=Escherichia coli, GI1790167, Length=610, Percent_Identity=55.9016393442623, Blast_Score=685, Evalue=0.0, Organism=Escherichia coli, GI1788651, Length=176, Percent_Identity=32.3863636363636, Blast_Score=79, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17539970, Length=716, Percent_Identity=33.7988826815642, Blast_Score=360, Evalue=2e-99, Organism=Caenorhabditis elegans, GI17532899, Length=723, Percent_Identity=33.3333333333333, Blast_Score=356, Evalue=2e-98, Organism=Caenorhabditis elegans, GI17532897, Length=736, Percent_Identity=32.6086956521739, Blast_Score=336, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6322745, Length=434, Percent_Identity=38.7096774193548, Blast_Score=282, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6323731, Length=432, Percent_Identity=28.2407407407407, Blast_Score=186, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6323730, Length=207, Percent_Identity=37.6811594202899, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI21357745, Length=690, Percent_Identity=35.0724637681159, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI28573187, Length=275, Percent_Identity=28.3636363636364, Blast_Score=76, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 66055; Mature: 66055
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIVGAIAGRDVVPVLIEGLKRLEYRGYDSSGIAVLDGVQVRRVRRTGRVAEMAQAAQA CCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH EQFGATLGIGHTRWATHGGVTEANAHPHISAGVALVHNGIIENHEEQREKLRALGYTFES HHHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHCCCCCC QTDTEVIAHLIHHHLGSAGDLLTALQRTVKELTGAYALAVMSQAEPERFVCARMGCPLLI CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE GVGEGENFVASDVSAIVQATRQVIFLEEGDTAELHRDGVRIFDGNDAPVERPLHLSDVSL ECCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCEEEECCCCCCCCCCCCCCCCCH ASLELGPFRHFMQKEIHEQPRALADTIEAAIDAKGFPASLFGANAEAVLRDIEGVQILAC HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHCCCCEEEEE GTSYYAGMTARYWIEAIAGLPCSVEIASEYRYRAAYANPKHLIVTISQSGETLDTMEALK CCHHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH YAKSLGHLHTLSICNVPESAIPRASELVCYTRAGAEIGVASTKAFTTQLAVLFQLTMVLG HHHHHCCEEEEEECCCCHHHCCCHHHEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHH KLQGRISDAEEAEYLEQLRFLPGSVQHALNLEPQIMAWAERFSPKENALFLGRGLHYPIA HHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCEE LEGALKLKEISYIHAEAYPAGELKHGPLALVDAAMPVVVIAPNDRLLEKVKSNMQEVRAR ECCCEEHHHHHEEEECCCCCCCCCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHC GGELFVFADQDSHFSDSEGVHVIRTPRHAGVLSPVIHTIPVQLLAYHTALARGTDVDKPR CCEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH NLAKSVTVE HHHHHCCCC >Mature Secondary Structure MCGIVGAIAGRDVVPVLIEGLKRLEYRGYDSSGIAVLDGVQVRRVRRTGRVAEMAQAAQA CCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH EQFGATLGIGHTRWATHGGVTEANAHPHISAGVALVHNGIIENHEEQREKLRALGYTFES HHHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHCCCCCC QTDTEVIAHLIHHHLGSAGDLLTALQRTVKELTGAYALAVMSQAEPERFVCARMGCPLLI CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE GVGEGENFVASDVSAIVQATRQVIFLEEGDTAELHRDGVRIFDGNDAPVERPLHLSDVSL ECCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCEEEECCCCCCCCCCCCCCCCCH ASLELGPFRHFMQKEIHEQPRALADTIEAAIDAKGFPASLFGANAEAVLRDIEGVQILAC HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHCCCCEEEEE GTSYYAGMTARYWIEAIAGLPCSVEIASEYRYRAAYANPKHLIVTISQSGETLDTMEALK CCHHHHCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH YAKSLGHLHTLSICNVPESAIPRASELVCYTRAGAEIGVASTKAFTTQLAVLFQLTMVLG HHHHHCCEEEEEECCCCHHHCCCHHHEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHH KLQGRISDAEEAEYLEQLRFLPGSVQHALNLEPQIMAWAERFSPKENALFLGRGLHYPIA HHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCEE LEGALKLKEISYIHAEAYPAGELKHGPLALVDAAMPVVVIAPNDRLLEKVKSNMQEVRAR ECCCEEHHHHHEEEECCCCCCCCCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHC GGELFVFADQDSHFSDSEGVHVIRTPRHAGVLSPVIHTIPVQLLAYHTALARGTDVDKPR CCEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH NLAKSVTVE HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]