| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is uptA
Identifier: 78049288
GI number: 78049288
Start: 4313631
End: 4314620
Strand: Reverse
Name: uptA
Synonym: XCV3732
Alternate gene names: NA
Gene position: 4314620-4313631 (Counterclockwise)
Preceding gene: 78049292
Following gene: 78049287
Centisome position: 83.32
GC content: 66.97
Gene sequence:
>990_bases ATGAAGCTAGGTTCCCTGAAGGAAGGCGGTCGCGACGGCAGCCTGATCGTGGTTTCGCGCGACCTGCGCACCGCCGTGCG CGCCACCGGCATCGCGCCCACGCTGCAGCGCGCGCTGGAGGACTGGAGCAATGTGGCGCCGCGCCTGAATGCCTTGTCGG CCTCGCTCAACGATGGCAGCGCCGACGGCGTGTTCGATCTGGATGTGCAGGCCTTGGCCGCCCCCTTGCCGCGCGCCTAC GAGTTCGTCGACGGCAGTGCCTACCTGCCGCATGTGGAGCGGGTGCGCCGCGCACGCAATGCCGAAGTGCCGGAAAGCTT CTACACCGACCCGCTGATGTACCAGGCCACCAGCGCCGGCTTCTATGGCCCGCGCGATGCCATCAAGGTGATCAGCGAGG ACTACGGCATCGACCTGGAGGCGGAGATTGTGGTCATCACCGACGACGTGCCGATGGGCGCCTCGCCCGAGCAGGCGGCC GCGCATATCCAGTTGGTGGGCCTGGTCAACGATGTCTCGCTGCGCAACCTGATTCCGGCCGAGCTCGCCAAGGGCTTTGG TTTCGTGCAATCCAAGCCGCGTTCGGCGCTGTCGCCGGTGTTCGTCACCCCCGACGAGCTGGACGATGCCTGGCGCGACA ACAAGGTGCATCTTCCGCTGGTCACGCACGTCAACGGCGCCTGGTTCGGCGCGCCCGAAGCCGGCAACGACATGCAGTTC GACTTCGCCCAACTGATCGCCCACGCCGCCAAGACCCGTCCGCTGTCGGCCGGCACCATCGTGGGCTCGGGCACCATCGC CAACCAGGACACCGCCTTGGGCGCCTCGTGTTTTGCCGAGCAACGCGTGGTCGAGACGCTGCGCGACGGCAAGCCCAGCA TGCCGTTCATGGCGTTCGGGGACATGGTGCGGATCGAGATGTTCGATGCCAGTGGCGCCAGCATCTTCGGTGCGATCGAA CAGCGCGTCGAGCGGCAGCCGCTGCCATGA
Upstream 100 bases:
>100_bases ATCGCGGTTTCGCGGTTGTGGTCACGGTCAGTTGTTTCAGGTGCAACCAGTAGTGCGGCAGGCCGTACAATCGTCCGATC AGCCACAGCACAGGATGGTC
Downstream 100 bases:
>100_bases CCTGCGGCGCAGCGACGACAGGCGGTCGCGTATGAGCGCGGCCCTGGAGCTGTTTTCGTACTGGCGCTCCAGCGCGGCGT ATCGCGTGCGCATCGGTCTT
Product: fumarylacetoacetate hydrolase family protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydroxylase; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKLGSLKEGGRDGSLIVVSRDLRTAVRATGIAPTLQRALEDWSNVAPRLNALSASLNDGSADGVFDLDVQALAAPLPRAY EFVDGSAYLPHVERVRRARNAEVPESFYTDPLMYQATSAGFYGPRDAIKVISEDYGIDLEAEIVVITDDVPMGASPEQAA AHIQLVGLVNDVSLRNLIPAELAKGFGFVQSKPRSALSPVFVTPDELDDAWRDNKVHLPLVTHVNGAWFGAPEAGNDMQF DFAQLIAHAAKTRPLSAGTIVGSGTIANQDTALGASCFAEQRVVETLRDGKPSMPFMAFGDMVRIEMFDASGASIFGAIE QRVERQPLP
Sequences:
>Translated_329_residues MKLGSLKEGGRDGSLIVVSRDLRTAVRATGIAPTLQRALEDWSNVAPRLNALSASLNDGSADGVFDLDVQALAAPLPRAY EFVDGSAYLPHVERVRRARNAEVPESFYTDPLMYQATSAGFYGPRDAIKVISEDYGIDLEAEIVVITDDVPMGASPEQAA AHIQLVGLVNDVSLRNLIPAELAKGFGFVQSKPRSALSPVFVTPDELDDAWRDNKVHLPLVTHVNGAWFGAPEAGNDMQF DFAQLIAHAAKTRPLSAGTIVGSGTIANQDTALGASCFAEQRVVETLRDGKPSMPFMAFGDMVRIEMFDASGASIFGAIE QRVERQPLP >Mature_329_residues MKLGSLKEGGRDGSLIVVSRDLRTAVRATGIAPTLQRALEDWSNVAPRLNALSASLNDGSADGVFDLDVQALAAPLPRAY EFVDGSAYLPHVERVRRARNAEVPESFYTDPLMYQATSAGFYGPRDAIKVISEDYGIDLEAEIVVITDDVPMGASPEQAA AHIQLVGLVNDVSLRNLIPAELAKGFGFVQSKPRSALSPVFVTPDELDDAWRDNKVHLPLVTHVNGAWFGAPEAGNDMQF DFAQLIAHAAKTRPLSAGTIVGSGTIANQDTALGASCFAEQRVVETLRDGKPSMPFMAFGDMVRIEMFDASGASIFGAIE QRVERQPLP
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35351; Mature: 35351
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGSLKEGGRDGSLIVVSRDLRTAVRATGIAPTLQRALEDWSNVAPRLNALSASLNDGS CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCC ADGVFDLDVQALAAPLPRAYEFVDGSAYLPHVERVRRARNAEVPESFYTDPLMYQATSAG CCCEEECCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEECCCC FYGPRDAIKVISEDYGIDLEAEIVVITDDVPMGASPEQAAAHIQLVGLVNDVSLRNLIPA CCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHEEEEEEEECCHHHHHCCHH ELAKGFGFVQSKPRSALSPVFVTPDELDDAWRDNKVHLPLVTHVNGAWFGAPEAGNDMQF HHHHCCCCCCCCCHHHCCCEEECCHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCH DFAQLIAHAAKTRPLSAGTIVGSGTIANQDTALGASCFAEQRVVETLRDGKPSMPFMAFG HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCC DMVRIEMFDASGASIFGAIEQRVERQPLP CEEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLGSLKEGGRDGSLIVVSRDLRTAVRATGIAPTLQRALEDWSNVAPRLNALSASLNDGS CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCC ADGVFDLDVQALAAPLPRAYEFVDGSAYLPHVERVRRARNAEVPESFYTDPLMYQATSAG CCCEEECCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEECCCC FYGPRDAIKVISEDYGIDLEAEIVVITDDVPMGASPEQAAAHIQLVGLVNDVSLRNLIPA CCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHEEEEEEEECCHHHHHCCHH ELAKGFGFVQSKPRSALSPVFVTPDELDDAWRDNKVHLPLVTHVNGAWFGAPEAGNDMQF HHHHCCCCCCCCCHHHCCCEEECCHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCH DFAQLIAHAAKTRPLSAGTIVGSGTIANQDTALGASCFAEQRVVETLRDGKPSMPFMAFG HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCC DMVRIEMFDASGASIFGAIEQRVERQPLP CEEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA