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The map label for this gene is uptD

Identifier: 78049285

GI number: 78049285

Start: 4310924

End: 4311307

Strand: Reverse

Name: uptD

Synonym: XCV3729

Alternate gene names: NA

Gene position: 4311307-4310924 (Counterclockwise)

Preceding gene: 78049287

Following gene: 78049284

Centisome position: 83.25

GC content: 66.15

Gene sequence:

>384_bases
ATGACGGCTAGCTTCGCATACTTGCGGCGATCCCTGTATGGCATCGCCTGTTTCATGGTCCTTTCCTCTCCGGCTGCCGC
CCAGGTGGCACCGGAGCTCACCGCCGCCGAACAGGCCGTGCAACGTGCCACCCAGGCCGATGCCGACCAATACGCCCCGG
ATCTGGTCAACCTGGCCCGCCAGGAATTGATGCAGGCCCAGCAGGCGCAACTGGACAAGCGCCAGCGCAAGCAGGTGCCC
CAGATCGCCTTGCGCGCCGCCGCCGACGCCGACCTGGCCAAGGCCCGCAGCGAAGAAGCGGTGGTCACCGCTCAACTGGA
ACAGCGCAGGAAGGAAGTGGCGCAGTTGCAGAACACCCTCAATACCGGGGAGGGCGGCCGATGA

Upstream 100 bases:

>100_bases
ATGCGCAATGGTTCCCCAACAAACAGCAGCGTCTCGTTGCAAGTCCGCCGCAGGCTTCCGACAATGGCCGTGCTCGAGAC
TTCTCGCTACGGCTCCCCTA

Downstream 100 bases:

>100_bases
AACTGCGCCCCCTGCTGTATCTCGGTGTGTTGAGCCTGGCCACGTTGCCGCCGCTGGCGATGGCGGCCAAGGACGACCCG
CAGGCCGACGCGCTCAACCG

Product: outer membrane protein UptD

Products: NA

Alternate protein names: Outer Membran Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTASFAYLRRSLYGIACFMVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLARQELMQAQQAQLDKRQRKQVP
QIALRAAADADLAKARSEEAVVTAQLEQRRKEVAQLQNTLNTGEGGR

Sequences:

>Translated_127_residues
MTASFAYLRRSLYGIACFMVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLARQELMQAQQAQLDKRQRKQVP
QIALRAAADADLAKARSEEAVVTAQLEQRRKEVAQLQNTLNTGEGGR
>Mature_126_residues
TASFAYLRRSLYGIACFMVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLARQELMQAQQAQLDKRQRKQVPQ
IALRAAADADLAKARSEEAVVTAQLEQRRKEVAQLQNTLNTGEGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13842; Mature: 13711

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASFAYLRRSLYGIACFMVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLAR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH
QELMQAQQAQLDKRQRKQVPQIALRAAADADLAKARSEEAVVTAQLEQRRKEVAQLQNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NTGEGGR
CCCCCCC
>Mature Secondary Structure 
TASFAYLRRSLYGIACFMVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLAR
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH
QELMQAQQAQLDKRQRKQVPQIALRAAADADLAKARSEEAVVTAQLEQRRKEVAQLQNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NTGEGGR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA