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The map label for this gene is xpsH [H]

Identifier: 78049221

GI number: 78049221

Start: 4220026

End: 4220535

Strand: Reverse

Name: xpsH [H]

Synonym: XCV3665

Alternate gene names: 78049221

Gene position: 4220535-4220026 (Counterclockwise)

Preceding gene: 78049222

Following gene: 78049220

Centisome position: 81.5

GC content: 69.02

Gene sequence:

>510_bases
ATGCGCGTTGCGTGTCAGCCGTTGCGTCATCGGCATGGAGTGGTCGGCCCTGGTCGGGCACGCGCGCGTGGCACCTCGTT
GCTGGAGATGCTGCTGGTGATCGCGTTGATCGCAATGGCCGGCGTGCTTGCTGCCGCAGCATTGAACGGCGGCATCGACG
GCATGCGCCTGCGCACTGCCGGCAAGGCCATCGCCTCGCAGCTGCGCTACACGCGCACCCAGGCGATTGCCACCGGCACA
CCGCAGCGGTTTCTGATCGACCCGCAGCAGCGGCGCTGGGAAGCACCCGGCGGCCATCACGGCGATCTGCCGCCGTCGCT
GGAAGTGCGCTTCACCGGCGCGCGCCAGGTGCAATCGCGGCAGGATCAGGGCGCGATCCAGTTCTTTCCGGATGGCGCGT
CCACCGGCGGGCGCATCGATCTGCAGGTCAAGGACGCCCGATGGCGTGTCGACGTGGGATGGATCACCGGTGAGGTGCGT
TCGGGCCCCTTGCGGACGCCGGCGCCATGA

Upstream 100 bases:

>100_bases
CGGCGACGGTCAGCCGTTCGATCTGATCAGCCTGGGCAAGGACGGCAAGCCCGGTGGCAGCAGTTACGACGCGGACATCA
AGTACCAATAAGCGCTCGCC

Downstream 100 bases:

>100_bases
AGCGTCAGCGCGGTTACACCCTGATCGAAGTGATCGTTGCCTTCGCGTTGCTGGCGTTGGCATTGACCCTGTTGCTGGGG
TCGTTGTCCGGCGCCGCACG

Product: general secretion pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRVACQPLRHRHGVVGPGRARARGTSLLEMLLVIALIAMAGVLAAAALNGGIDGMRLRTAGKAIASQLRYTRTQAIATGT
PQRFLIDPQQRRWEAPGGHHGDLPPSLEVRFTGARQVQSRQDQGAIQFFPDGASTGGRIDLQVKDARWRVDVGWITGEVR
SGPLRTPAP

Sequences:

>Translated_169_residues
MRVACQPLRHRHGVVGPGRARARGTSLLEMLLVIALIAMAGVLAAAALNGGIDGMRLRTAGKAIASQLRYTRTQAIATGT
PQRFLIDPQQRRWEAPGGHHGDLPPSLEVRFTGARQVQSRQDQGAIQFFPDGASTGGRIDLQVKDARWRVDVGWITGEVR
SGPLRTPAP
>Mature_169_residues
MRVACQPLRHRHGVVGPGRARARGTSLLEMLLVIALIAMAGVLAAAALNGGIDGMRLRTAGKAIASQLRYTRTQAIATGT
PQRFLIDPQQRRWEAPGGHHGDLPPSLEVRFTGARQVQSRQDQGAIQFFPDGASTGGRIDLQVKDARWRVDVGWITGEVR
SGPLRTPAP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP H family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18229; Mature: 18229

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVACQPLRHRHGVVGPGRARARGTSLLEMLLVIALIAMAGVLAAAALNGGIDGMRLRTA
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
GKAIASQLRYTRTQAIATGTPQRFLIDPQQRRWEAPGGHHGDLPPSLEVRFTGARQVQSR
HHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHH
QDQGAIQFFPDGASTGGRIDLQVKDARWRVDVGWITGEVRSGPLRTPAP
CCCCCEEEECCCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRVACQPLRHRHGVVGPGRARARGTSLLEMLLVIALIAMAGVLAAAALNGGIDGMRLRTA
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
GKAIASQLRYTRTQAIATGTPQRFLIDPQQRRWEAPGGHHGDLPPSLEVRFTGARQVQSR
HHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHH
QDQGAIQFFPDGASTGGRIDLQVKDARWRVDVGWITGEVRSGPLRTPAP
CCCCCEEEECCCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1944223; 12024217 [H]