| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is bcsA [H]
Identifier: 78049200
GI number: 78049200
Start: 4195680
End: 4197041
Strand: Reverse
Name: bcsA [H]
Synonym: XCV3644
Alternate gene names: 78049200
Gene position: 4197041-4195680 (Counterclockwise)
Preceding gene: 78049201
Following gene: 78049199
Centisome position: 81.05
GC content: 64.46
Gene sequence:
>1362_bases GTGCGCTTGTCGCTTGTTGTGCCGCACGCCGCCATGCCTGAAGGACGATTGATGACCGCTGCCAACCGCCATTGCGCATC ACCGCTGCCGACGCTGGCGACCTGGGCGCTGTGGTTGCTGGGTGCGTTGCTGCTGGTGTTCGTGGTGGCCGTGTCGATGG ATGTGACGCAGCAGCTGGTGTTTTCCGGCGTGTTGTTCGCGGTGGCGCTGGCGGTGCGCAACCGCGGCGGGCGGGTGGTC ATCCTGATGATGATGGGGATGTCGCTGGCGGTGTCGTGCCGCTACATCTGGTGGCGCATGACCCAGACCATGGGCGTGGG CAGCGCGGTGGATTTCATCCTCGGCCTGGGCCTGCTTGGCGCCGAGCTGTATGCCTTCGTGATCCTGGTGCTGGGCTATT TCCAGGTGCTGTGGCCGCTCAACCGCAAGCCGGTGCCGCTGCCGGCCGACCAGCGCCTGTGGCCCAGCGTGGACGTGTTC ATCCCGACCTACAACGAGCCGCTGTCGGTGGTGCGCACCACCGTGCTGGCGGCCAGCGTGATCGATTGGCCGGCCGGCAA GATCACCATCCATTTGCTGGACGACGGCCGTCGCGACGAGTTTCGCGCGTTCTGCGCCGAGGTCGGCATCAACTACGTCA CCCGCACCAACAACGCGCATGCCAAGGCCGGCAACATCAATGCCGCGTTGAAGAAGTGCAGTGGCGATTATGTGGCCATC TTCGATTGCGACCACATTCCCACCCGCAGTTTTCTGCAGGTGGCGATGGGCTGGTTCCTGCACGACACCAAGCTGGCACT GGTGCAGATGCCGCACTATTTCTTTTCGCCGGACCCGTTCGAACGCAACCTGGACACGCATGGCAAGGTGCCCAACGAAG GCGAGTTGTTCTACGGCCTGCTGCAGGATGGCAACGACCAGTGGAATGCCACGTTCTTCTGTGGCTCGTGTGCGGTGATC AAGCGCACCGCGCTGGAAGAAGTGGGCGGCGTGGCGGTGGAAACGGTCACCGAAGATGCGCACACCGCGCTCAAGCTGCA GCGCCGCGGTTACCGCACCGCCTACCTGGCCGTGCCGCAGGCGGCGGGTCTGGCCACCGAAAGCTTGTCCGGCCACGTGG CGCAGCGCATCCGCTGGGCGCGCGGCATGGCGCAGATCGCGCGCATCGACAACCCCTTGCTGGGGCGCGGGCTCAAACTG TCGCAGCGGCTGTGCTACCTCAACGCGATGCTGCACTTCTTCTATGGTTTGCCGCGCATCATCTATCTGACTGCGCCGCT GGCCTATCTGTTTTTCGGCGCGCACGTGATCCAGGCCTCGGCGTTGATGATCCTGGCCTACGCCTTGCCGCACATCCTGT AG
Upstream 100 bases:
>100_bases GCGCCTGTTGCAGGCCGATGCGCGCAGCTGCGCGCAAAGCCCGCTCAAGCGCCTGCGCTCGCGTTGAGCTGTTGCCCGTT GTTTCCCGCTGCAGGCGCCG
Downstream 100 bases:
>100_bases GCCAACCTGACCAACCTGCGCGTGCAGAGCCGCTTCCGCCATCTGCTGTGGAACGAGGTCTATGAAACCACGCTGGCCTG GTACATCTTCCGTCCCACGC
Product: cellulose synthase catalytic subunit [UDP-forming] (fragment)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MRLSLVVPHAAMPEGRLMTAANRHCASPLPTLATWALWLLGALLLVFVVAVSMDVTQQLVFSGVLFAVALAVRNRGGRVV ILMMMGMSLAVSCRYIWWRMTQTMGVGSAVDFILGLGLLGAELYAFVILVLGYFQVLWPLNRKPVPLPADQRLWPSVDVF IPTYNEPLSVVRTTVLAASVIDWPAGKITIHLLDDGRRDEFRAFCAEVGINYVTRTNNAHAKAGNINAALKKCSGDYVAI FDCDHIPTRSFLQVAMGWFLHDTKLALVQMPHYFFSPDPFERNLDTHGKVPNEGELFYGLLQDGNDQWNATFFCGSCAVI KRTALEEVGGVAVETVTEDAHTALKLQRRGYRTAYLAVPQAAGLATESLSGHVAQRIRWARGMAQIARIDNPLLGRGLKL SQRLCYLNAMLHFFYGLPRIIYLTAPLAYLFFGAHVIQASALMILAYALPHIL
Sequences:
>Translated_453_residues MRLSLVVPHAAMPEGRLMTAANRHCASPLPTLATWALWLLGALLLVFVVAVSMDVTQQLVFSGVLFAVALAVRNRGGRVV ILMMMGMSLAVSCRYIWWRMTQTMGVGSAVDFILGLGLLGAELYAFVILVLGYFQVLWPLNRKPVPLPADQRLWPSVDVF IPTYNEPLSVVRTTVLAASVIDWPAGKITIHLLDDGRRDEFRAFCAEVGINYVTRTNNAHAKAGNINAALKKCSGDYVAI FDCDHIPTRSFLQVAMGWFLHDTKLALVQMPHYFFSPDPFERNLDTHGKVPNEGELFYGLLQDGNDQWNATFFCGSCAVI KRTALEEVGGVAVETVTEDAHTALKLQRRGYRTAYLAVPQAAGLATESLSGHVAQRIRWARGMAQIARIDNPLLGRGLKL SQRLCYLNAMLHFFYGLPRIIYLTAPLAYLFFGAHVIQASALMILAYALPHIL >Mature_453_residues MRLSLVVPHAAMPEGRLMTAANRHCASPLPTLATWALWLLGALLLVFVVAVSMDVTQQLVFSGVLFAVALAVRNRGGRVV ILMMMGMSLAVSCRYIWWRMTQTMGVGSAVDFILGLGLLGAELYAFVILVLGYFQVLWPLNRKPVPLPADQRLWPSVDVF IPTYNEPLSVVRTTVLAASVIDWPAGKITIHLLDDGRRDEFRAFCAEVGINYVTRTNNAHAKAGNINAALKKCSGDYVAI FDCDHIPTRSFLQVAMGWFLHDTKLALVQMPHYFFSPDPFERNLDTHGKVPNEGELFYGLLQDGNDQWNATFFCGSCAVI KRTALEEVGGVAVETVTEDAHTALKLQRRGYRTAYLAVPQAAGLATESLSGHVAQRIRWARGMAQIARIDNPLLGRGLKL SQRLCYLNAMLHFFYGLPRIIYLTAPLAYLFFGAHVIQASALMILAYALPHIL
Specific function: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection [H]
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PilZ domain [H]
Homologues:
Organism=Escherichia coli, GI87082284, Length=421, Percent_Identity=61.0451306413302, Blast_Score=555, Evalue=1e-159,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003919 - InterPro: IPR005150 - InterPro: IPR001173 - InterPro: IPR009875 [H]
Pfam domain/function: PF03552 Cellulose_synt; PF00535 Glycos_transf_2; PF07238 PilZ [H]
EC number: =2.4.1.12 [H]
Molecular weight: Translated: 50104; Mature: 50104
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSLVVPHAAMPEGRLMTAANRHCASPLPTLATWALWLLGALLLVFVVAVSMDVTQQLV CEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGVLFAVALAVRNRGGRVVILMMMGMSLAVSCRYIWWRMTQTMGVGSAVDFILGLGLLG HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AELYAFVILVLGYFQVLWPLNRKPVPLPADQRLWPSVDVFIPTYNEPLSVVRTTVLAASV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH IDWPAGKITIHLLDDGRRDEFRAFCAEVGINYVTRTNNAHAKAGNINAALKKCSGDYVAI HCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCEEEE FDCDHIPTRSFLQVAMGWFLHDTKLALVQMPHYFFSPDPFERNLDTHGKVPNEGELFYGL EECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCEEEEE LQDGNDQWNATFFCGSCAVIKRTALEEVGGVAVETVTEDAHTALKLQRRGYRTAYLAVPQ ECCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCEEEEECCC AAGLATESLSGHVAQRIRWARGMAQIARIDNPLLGRGLKLSQRLCYLNAMLHFFYGLPRI HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHH IYLTAPLAYLFFGAHVIQASALMILAYALPHIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLSLVVPHAAMPEGRLMTAANRHCASPLPTLATWALWLLGALLLVFVVAVSMDVTQQLV CEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSGVLFAVALAVRNRGGRVVILMMMGMSLAVSCRYIWWRMTQTMGVGSAVDFILGLGLLG HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AELYAFVILVLGYFQVLWPLNRKPVPLPADQRLWPSVDVFIPTYNEPLSVVRTTVLAASV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH IDWPAGKITIHLLDDGRRDEFRAFCAEVGINYVTRTNNAHAKAGNINAALKKCSGDYVAI HCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCEEEE FDCDHIPTRSFLQVAMGWFLHDTKLALVQMPHYFFSPDPFERNLDTHGKVPNEGELFYGL EECCCCCHHHHHHHHHHHHHHCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCEEEEE LQDGNDQWNATFFCGSCAVIKRTALEEVGGVAVETVTEDAHTALKLQRRGYRTAYLAVPQ ECCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCEEEEECCC AAGLATESLSGHVAQRIRWARGMAQIARIDNPLLGRGLKLSQRLCYLNAMLHFFYGLPRI HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHH IYLTAPLAYLFFGAHVIQASALMILAYALPHIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]