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The map label for this gene is rob [C]

Identifier: 78049129

GI number: 78049129

Start: 4094908

End: 4095801

Strand: Reverse

Name: rob [C]

Synonym: XCV3573

Alternate gene names: 78049129

Gene position: 4095801-4094908 (Counterclockwise)

Preceding gene: 78049130

Following gene: 78049128

Centisome position: 79.09

GC content: 62.86

Gene sequence:

>894_bases
ATGCAACAGGTCATCACCGCGGATCGTGGGCTTGCGCTCGCGCTCGATAGCGCCAACGAGTCGACATCGACCACCTGTCT
GGCGGTCTCGCGGCTCGGCAGCATCCGTACCAACGCAGCGACATTCACCTTGTGGATACAGCTACGCGGACGCGCATGGG
TGGAATCCAAGGAGGGCCGCTTTCGTCTGCGTGCCGGCGACTGGATCGCCTTCGACAAGGATTCCCATCCCACCGTGCAG
GCAGATCGCAGCGCGCTATGCGTGGGCGTCGGTCTGGATGGCGAGAGCCTGCAGTCGCTTGCCGAACTAACCGATGCCAC
GCTGTATCCCGGCCGCGCCCAGTTGTCGCGCAGCGATCTGCGCATCGCCTTGCGCCTGTGGCGCAGTGCCGCCGCACAAA
GCGGCAGTGCGTCCGCGCGGCCGTTGCTGTTGCACCTGGCCGCGATGCAACGCGATTTTATTGCGCAGGAACAGCGTTGC
CCGGGCCGCTCGCGCAGCCGTCGGCGTCAGGTGTTTGGGCGTATGCAGCGTGCACGGCTGTACCTGGAAGGCAACAGCGA
CCGCGTGGTGCGCATCAGCGAACTGGCGCAGCTGACCAACTTTTCCAGTTGGTACGTCTCCAAGACGTTTCAGAGTTTGT
ACGAAGAAAGCCCGCAGGCGCTGTCCGCACGCTTGCGTCTGGAACGTGCATCCGATTTGTTGCGCGATACCTCGATGATG
ATCGGCGAGGTTGCAGCCGCAAGCGGCTTCGACAATTGCTGCAGCTTCGCGCGTGCGTTTCGTGCGCGCTTCGGTGTCTC
CGCATCGCACTACCGCGACCAAACGGCAAATCCGCCAGATTCGGCAAAGCCACGTAACGTGACGCGCAAAGCGACGGCAT
TCACGCAATCGTAA

Upstream 100 bases:

>100_bases
AAGGCTTCGTGGCAATTTCGGCGCAGTTTCGTCAAAACTTCCTGACTGACGCCACAGTCGGCAAAACACTACGCCCTCTT
TTGTACAGGGGGCTGCCAAC

Downstream 100 bases:

>100_bases
TTTGCACAGGGGCGCTTAACGCGCCACTAACGAACCCTGGAGAGATTGATGAACCTTCGCACCTCCGCAGTGCGGCTGGG
CCTGTTGCCCGCCGGTATTG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Hth Transcriptional Regulator

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQQVITADRGLALALDSANESTSTTCLAVSRLGSIRTNAATFTLWIQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPTVQ
ADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRSDLRIALRLWRSAAAQSGSASARPLLLHLAAMQRDFIAQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRNVTRKATAFTQS

Sequences:

>Translated_297_residues
MQQVITADRGLALALDSANESTSTTCLAVSRLGSIRTNAATFTLWIQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPTVQ
ADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRSDLRIALRLWRSAAAQSGSASARPLLLHLAAMQRDFIAQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRNVTRKATAFTQS
>Mature_297_residues
MQQVITADRGLALALDSANESTSTTCLAVSRLGSIRTNAATFTLWIQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPTVQ
ADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRSDLRIALRLWRSAAAQSGSASARPLLLHLAAMQRDFIAQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRNVTRKATAFTQS

Specific function: Binds To The Right Arm Of The Replication Origin Oric Of The E.Coli Chromosome. Rob Binding May Influence The Formation Of The Nucleoprotein Structure, Required For Oric Function In The Initiation Of Replication. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32930; Mature: 32930

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVITADRGLALALDSANESTSTTCLAVSRLGSIRTNAATFTLWIQLRGRAWVESKEGR
CCCCEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCC
FRLRAGDWIAFDKDSHPTVQADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRSDL
EEEEECCEEEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
RIALRLWRSAAAQSGSASARPLLLHLAAMQRDFIAQEQRCPGRSRSRRRQVFGRMQRARL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEE
YLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRNVTRKATAFTQS
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MQQVITADRGLALALDSANESTSTTCLAVSRLGSIRTNAATFTLWIQLRGRAWVESKEGR
CCCCEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCC
FRLRAGDWIAFDKDSHPTVQADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRSDL
EEEEECCEEEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
RIALRLWRSAAAQSGSASARPLLLHLAAMQRDFIAQEQRCPGRSRSRRRQVFGRMQRARL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEE
YLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRNVTRKATAFTQS
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA