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The map label for this gene is 78049125

Identifier: 78049125

GI number: 78049125

Start: 4089121

End: 4089603

Strand: Reverse

Name: 78049125

Synonym: XCV3569

Alternate gene names: NA

Gene position: 4089603-4089121 (Counterclockwise)

Preceding gene: 78049128

Following gene: 78049123

Centisome position: 78.97

GC content: 66.05

Gene sequence:

>483_bases
ATGTCCAGGCTTGCGCGTTTGCTGGTTCTCCTGCTGCTGTCCCTTACCGCCCAGTTCGCTGCCGCCGCGACGCCTCCGCC
CACCTTCGTGGATGCGGTGGACTGGCCCGCCAATGGCGAGGGCTGGGAGGCGTTCATCGATCTGGAGCAGCGGCTGGACC
GCGATTTCGACAATATCTGCGGCGACACCTTTTGTGGCGGCGACTTCAGCGACTACCAGCCGCTGCGCTTCCGCTGCTCG
GTGCATCGCGTCACCGGGGTGGTGCGGAGCTGCATCTGGACCTTCGGCGCCAGTGAGGTCAGCGTCGACCCGCGTAGCGG
TTACTTGCGGTCGGACAGCCGGGTGTGGCGCTGCACGGCACCGTTGAAGGCCGGTACCCGCCTGGATGAGATGTATCGCA
CGCTTGCGGTGGCCAATCCGCTGTTCAAGCCACTGCCGAGCGGCGCACCGCCGATCTATGACGGCCTGATCGGCTGCCTG
TGA

Upstream 100 bases:

>100_bases
GCGTGCGGCATAGCCCGCGTTCATCGCGGGTGGCTGCCTGATCGTTGCGGCCCGGCCGGAGGCGCACGCTGCAGGCTCAT
CCACCGCATAGGAATTGCCC

Downstream 100 bases:

>100_bases
TCGTAGGCCGGGCGGGACGGGGGCTTGCCGGCACAGGCCAGCCCCTTCTGCCTGATGGCGCCATCTTCTTATCGACGATG
GGGGCCGCCAGCGGGCCCCG

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSRLARLLVLLLLSLTAQFAAAATPPPTFVDAVDWPANGEGWEAFIDLEQRLDRDFDNICGDTFCGGDFSDYQPLRFRCS
VHRVTGVVRSCIWTFGASEVSVDPRSGYLRSDSRVWRCTAPLKAGTRLDEMYRTLAVANPLFKPLPSGAPPIYDGLIGCL

Sequences:

>Translated_160_residues
MSRLARLLVLLLLSLTAQFAAAATPPPTFVDAVDWPANGEGWEAFIDLEQRLDRDFDNICGDTFCGGDFSDYQPLRFRCS
VHRVTGVVRSCIWTFGASEVSVDPRSGYLRSDSRVWRCTAPLKAGTRLDEMYRTLAVANPLFKPLPSGAPPIYDGLIGCL
>Mature_159_residues
SRLARLLVLLLLSLTAQFAAAATPPPTFVDAVDWPANGEGWEAFIDLEQRLDRDFDNICGDTFCGGDFSDYQPLRFRCSV
HRVTGVVRSCIWTFGASEVSVDPRSGYLRSDSRVWRCTAPLKAGTRLDEMYRTLAVANPLFKPLPSGAPPIYDGLIGCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17660; Mature: 17529

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLARLLVLLLLSLTAQFAAAATPPPTFVDAVDWPANGEGWEAFIDLEQRLDRDFDNIC
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHC
GDTFCGGDFSDYQPLRFRCSVHRVTGVVRSCIWTFGASEVSVDPRSGYLRSDSRVWRCTA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEEC
PLKAGTRLDEMYRTLAVANPLFKPLPSGAPPIYDGLIGCL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SRLARLLVLLLLSLTAQFAAAATPPPTFVDAVDWPANGEGWEAFIDLEQRLDRDFDNIC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHC
GDTFCGGDFSDYQPLRFRCSVHRVTGVVRSCIWTFGASEVSVDPRSGYLRSDSRVWRCTA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEEC
PLKAGTRLDEMYRTLAVANPLFKPLPSGAPPIYDGLIGCL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA