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The map label for this gene is rpmE2

Identifier: 78049062

GI number: 78049062

Start: 4018381

End: 4018623

Strand: Reverse

Name: rpmE2

Synonym: XCV3506

Alternate gene names: 78049062

Gene position: 4018623-4018381 (Counterclockwise)

Preceding gene: 78049063

Following gene: 78049061

Centisome position: 77.6

GC content: 53.91

Gene sequence:

>243_bases
ATGAAAGATAACGTTCATCCCAACTACAAAGACGTCGTCTTTCACGACGTGACGTCCGATTTCAAGATTCTGACCCGTTC
CACCATGACCTCGAAAGAGACCGTGAAGTGGGAAGACGGCCAGGAGTATCCGCTGATCAAGGTGGAAATTTCCTCGTCCT
CGCACCCGTTCTATACCGGCAAGCACAAGGTGATCGACACCGGCGGCCGGATCGACAAGTTCCAGAAGCGCTACGCGCGC
TGA

Upstream 100 bases:

>100_bases
TGGTCGGGGCCGCCCTGGCGGCGAACTGAGGCGACCTTGCGCCGGCTGCCTGGGCGCAGCTATAATACCCGACTTATCCA
GGCAGCCCGGCGCCAAGTCC

Downstream 100 bases:

>100_bases
ACTTGCAGGACGGGCTGTACCGGCAGCGGCCGCGCATTGCGCGGCCGTTGTTTTTTGGGGCGCTGAACGCTTCGCCTGTA
TGCCTGGCGCGATGCGTCTA

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKDNVHPNYKDVVFHDVTSDFKILTRSTMTSKETVKWEDGQEYPLIKVEISSSSHPFYTGKHKVIDTGGRIDKFQKRYAR

Sequences:

>Translated_80_residues
MKDNVHPNYKDVVFHDVTSDFKILTRSTMTSKETVKWEDGQEYPLIKVEISSSSHPFYTGKHKVIDTGGRIDKFQKRYAR
>Mature_80_residues
MKDNVHPNYKDVVFHDVTSDFKILTRSTMTSKETVKWEDGQEYPLIKVEISSSSHPFYTGKHKVIDTGGRIDKFQKRYAR

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=80, Percent_Identity=40, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_XANAC (Q8PH70)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_643696.1
- ProteinModelPortal:   Q8PH70
- SMR:   Q8PH70
- GeneID:   1157460
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC3389
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- ProtClustDB:   PRK01678
- BioCyc:   XAXO190486:XAC3389-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9364; Mature: 9364

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNVHPNYKDVVFHDVTSDFKILTRSTMTSKETVKWEDGQEYPLIKVEISSSSHPFYTG
CCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECCCCCCEECC
KHKVIDTGGRIDKFQKRYAR
CEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MKDNVHPNYKDVVFHDVTSDFKILTRSTMTSKETVKWEDGQEYPLIKVEISSSSHPFYTG
CCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECCCCCCEECC
KHKVIDTGGRIDKFQKRYAR
CEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217