Click here to switch to the map view.

The map label for this gene is 78049051

Identifier: 78049051

GI number: 78049051

Start: 4005575

End: 4006537

Strand: Reverse

Name: 78049051

Synonym: XCV3495

Alternate gene names: NA

Gene position: 4006537-4005575 (Counterclockwise)

Preceding gene: 78049052

Following gene: 78049050

Centisome position: 77.37

GC content: 69.47

Gene sequence:

>963_bases
ATGCCGCACTCTCGCCAGACACCGATGTCTTCGATGCCGTTCTCGTCCCCTGAAGCCGCCACCTCGCCAGTCGCTGGCGA
TGGAGTGCGCCCAGCGCTTGCAGAACTGATTGCGCTGCGCGGTACTGCAATCCATCGCGGTCAACCGGGACGTGGCCGGC
ACGGGGTGGTGGGGCCGGTGCCGGCCGCCACGCGCGGGCGCGGCATGGAATATGCCGAGTCGCGTGAGTACGTGGCTGGC
GATGATGCGCGGCATATCGATTGGCGCGTGACCGCGCGAACCGGGCGAGCGCACACCAAATTGTTTCAGGCTGAGCGCGA
GCGTTTGAGCCTGATCGTGGCCGATACCTCGCCTGCGCTCTTCTTCGGTACGCGCGTGCGCTACAAATCGGTGCAGGCCG
CACGCGCCGGCGCGGTCGCCGCATGGCTGGCGCAGCGCCAGGGCGATCGTATTGCAGCCTTGCGCGGCACCGCGAGCGAG
GCGCCGATTGCGCCGCGGTCCGGTCAGCGTGGTGTGCTGCCGGTGTTGGATGCCTTGGCGCGTTGGTATGCCCAGCCGCC
GTCCGGCGATGCGGGGCTGGAGGTGGCGCTGGATCATGCGGCGCGCCTGTTGCGCCCCGGCGCGCGCCTGACCGTGCTGG
CCGATGCGCGCAGCGCCGGCCGGATTTCTGCCACGCGCTGGTCGGGCTTGGCCTTGCATCACGAGGTGGTGGTGATCGTG
CTGGTCGATCCGCTGGAACTGGCGCCACCGGCACGTGCAGTCACCTTCGACGTGCGTGGCGAGCGCATCGCGATCGATCT
GTCGACCCAGGCCGGACGTGCACGCTGGCAGGCCGAATTCGTCGCGCCGCTGGAGCATTTGGGATCGCTCCTGCAGGCAC
GCGGCGTGCGCTTGCATCGCCTGTCCACCGACGATGCCAGCGATGCGTGGTTGGGCGGCAGCCCTGCCGCGCGGAGTCGC
TGA

Upstream 100 bases:

>100_bases
CCAGCTACGAGGCCACCGCCGAGGGTTGGGACGGCGAACGCCTGATCGCTGCACTGCTCGAAAAGATTCCGCTGCCCTGA
TCGGGCAGCGTCGCTGAGGT

Downstream 100 bases:

>100_bases
CGATGTCCCCGCAGTCGCTGCCGCTGCGTGATGTGCACCTGCCGCCGTCGCCGTCGTGGTGGCCGCTGGCACCTGGCTGG
TGGCTGGTGATCGCGGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPHSRQTPMSSMPFSSPEAATSPVAGDGVRPALAELIALRGTAIHRGQPGRGRHGVVGPVPAATRGRGMEYAESREYVAG
DDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTSPALFFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASE
APIAPRSGQRGVLPVLDALARWYAQPPSGDAGLEVALDHAARLLRPGARLTVLADARSAGRISATRWSGLALHHEVVVIV
LVDPLELAPPARAVTFDVRGERIAIDLSTQAGRARWQAEFVAPLEHLGSLLQARGVRLHRLSTDDASDAWLGGSPAARSR

Sequences:

>Translated_320_residues
MPHSRQTPMSSMPFSSPEAATSPVAGDGVRPALAELIALRGTAIHRGQPGRGRHGVVGPVPAATRGRGMEYAESREYVAG
DDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTSPALFFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASE
APIAPRSGQRGVLPVLDALARWYAQPPSGDAGLEVALDHAARLLRPGARLTVLADARSAGRISATRWSGLALHHEVVVIV
LVDPLELAPPARAVTFDVRGERIAIDLSTQAGRARWQAEFVAPLEHLGSLLQARGVRLHRLSTDDASDAWLGGSPAARSR
>Mature_319_residues
PHSRQTPMSSMPFSSPEAATSPVAGDGVRPALAELIALRGTAIHRGQPGRGRHGVVGPVPAATRGRGMEYAESREYVAGD
DARHIDWRVTARTGRAHTKLFQAERERLSLIVADTSPALFFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASEA
PIAPRSGQRGVLPVLDALARWYAQPPSGDAGLEVALDHAARLLRPGARLTVLADARSAGRISATRWSGLALHHEVVVIVL
VDPLELAPPARAVTFDVRGERIAIDLSTQAGRARWQAEFVAPLEHLGSLLQARGVRLHRLSTDDASDAWLGGSPAARSR

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 34184; Mature: 34053

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHSRQTPMSSMPFSSPEAATSPVAGDGVRPALAELIALRGTAIHRGQPGRGRHGVVGPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCC
PAATRGRGMEYAESREYVAGDDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTSPAL
CCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCCCCE
FFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRSGQRGVLPVLDALA
EEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
RWYAQPPSGDAGLEVALDHAARLLRPGARLTVLADARSAGRISATRWSGLALHHEVVVIV
HHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEEEE
LVDPLELAPPARAVTFDVRGERIAIDLSTQAGRARWQAEFVAPLEHLGSLLQARGVRLHR
EECCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
LSTDDASDAWLGGSPAARSR
ECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PHSRQTPMSSMPFSSPEAATSPVAGDGVRPALAELIALRGTAIHRGQPGRGRHGVVGPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCC
PAATRGRGMEYAESREYVAGDDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTSPAL
CCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCCCCE
FFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRSGQRGVLPVLDALA
EEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
RWYAQPPSGDAGLEVALDHAARLLRPGARLTVLADARSAGRISATRWSGLALHHEVVVIV
HHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEEEEE
LVDPLELAPPARAVTFDVRGERIAIDLSTQAGRARWQAEFVAPLEHLGSLLQARGVRLHR
EECCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
LSTDDASDAWLGGSPAARSR
ECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]